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Three-Dimensional Semantic Segmentation of Diabetic Retinopathy Lesions and Grading Using Transfer Learning

Diabetic retinopathy (DR) is a drastic disease. DR embarks on vision impairment when it is left undetected. In this article, learning-based techniques are presented for the segmentation and classification of DR lesions. The pre-trained Xception model is utilized for deep feature extraction in the se...

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Detalles Bibliográficos
Autores principales: Shaukat, Natasha, Amin, Javeria, Sharif, Muhammad, Azam, Faisal, Kadry, Seifedine, Krishnamoorthy, Sujatha
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9501488/
https://www.ncbi.nlm.nih.gov/pubmed/36143239
http://dx.doi.org/10.3390/jpm12091454
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author Shaukat, Natasha
Amin, Javeria
Sharif, Muhammad
Azam, Faisal
Kadry, Seifedine
Krishnamoorthy, Sujatha
author_facet Shaukat, Natasha
Amin, Javeria
Sharif, Muhammad
Azam, Faisal
Kadry, Seifedine
Krishnamoorthy, Sujatha
author_sort Shaukat, Natasha
collection PubMed
description Diabetic retinopathy (DR) is a drastic disease. DR embarks on vision impairment when it is left undetected. In this article, learning-based techniques are presented for the segmentation and classification of DR lesions. The pre-trained Xception model is utilized for deep feature extraction in the segmentation phase. The extracted features are fed to Deeplabv3 for semantic segmentation. For the training of the segmentation model, an experiment is performed for the selection of the optimal hyperparameters that provided effective segmentation results in the testing phase. The multi-classification model is developed for feature extraction using the fully connected (FC) MatMul layer of efficient-net-b0 and pool-10 of the squeeze-net. The extracted features from both models are fused serially, having the dimension of N × 2020, amidst the best N × 1032 features chosen by applying the marine predictor algorithm (MPA). The multi-classification of the DR lesions into grades 0, 1, 2, and 3 is performed using neural network and KNN classifiers. The proposed method performance is validated on open access datasets such as DIARETDB1, e-ophtha-EX, IDRiD, and Messidor. The obtained results are better compared to those of the latest published works.
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spelling pubmed-95014882022-09-24 Three-Dimensional Semantic Segmentation of Diabetic Retinopathy Lesions and Grading Using Transfer Learning Shaukat, Natasha Amin, Javeria Sharif, Muhammad Azam, Faisal Kadry, Seifedine Krishnamoorthy, Sujatha J Pers Med Article Diabetic retinopathy (DR) is a drastic disease. DR embarks on vision impairment when it is left undetected. In this article, learning-based techniques are presented for the segmentation and classification of DR lesions. The pre-trained Xception model is utilized for deep feature extraction in the segmentation phase. The extracted features are fed to Deeplabv3 for semantic segmentation. For the training of the segmentation model, an experiment is performed for the selection of the optimal hyperparameters that provided effective segmentation results in the testing phase. The multi-classification model is developed for feature extraction using the fully connected (FC) MatMul layer of efficient-net-b0 and pool-10 of the squeeze-net. The extracted features from both models are fused serially, having the dimension of N × 2020, amidst the best N × 1032 features chosen by applying the marine predictor algorithm (MPA). The multi-classification of the DR lesions into grades 0, 1, 2, and 3 is performed using neural network and KNN classifiers. The proposed method performance is validated on open access datasets such as DIARETDB1, e-ophtha-EX, IDRiD, and Messidor. The obtained results are better compared to those of the latest published works. MDPI 2022-09-05 /pmc/articles/PMC9501488/ /pubmed/36143239 http://dx.doi.org/10.3390/jpm12091454 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Shaukat, Natasha
Amin, Javeria
Sharif, Muhammad
Azam, Faisal
Kadry, Seifedine
Krishnamoorthy, Sujatha
Three-Dimensional Semantic Segmentation of Diabetic Retinopathy Lesions and Grading Using Transfer Learning
title Three-Dimensional Semantic Segmentation of Diabetic Retinopathy Lesions and Grading Using Transfer Learning
title_full Three-Dimensional Semantic Segmentation of Diabetic Retinopathy Lesions and Grading Using Transfer Learning
title_fullStr Three-Dimensional Semantic Segmentation of Diabetic Retinopathy Lesions and Grading Using Transfer Learning
title_full_unstemmed Three-Dimensional Semantic Segmentation of Diabetic Retinopathy Lesions and Grading Using Transfer Learning
title_short Three-Dimensional Semantic Segmentation of Diabetic Retinopathy Lesions and Grading Using Transfer Learning
title_sort three-dimensional semantic segmentation of diabetic retinopathy lesions and grading using transfer learning
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9501488/
https://www.ncbi.nlm.nih.gov/pubmed/36143239
http://dx.doi.org/10.3390/jpm12091454
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