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Genetics-informed precision treatment formulation in schizophrenia and bipolar disorder

Genetically informed drug development and repurposing is an attractive prospect for improving patient outcomes in psychiatry; however, the effectiveness of these endeavors is confounded by heterogeneity. We propose an approach that links interventions implicated by disorder-associated genetic risk,...

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Autores principales: Reay, William R., Geaghan, Michael P., Atkins, Joshua R., Carr, Vaughan J., Green, Melissa J., Cairns, Murray J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9502060/
https://www.ncbi.nlm.nih.gov/pubmed/36055211
http://dx.doi.org/10.1016/j.ajhg.2022.07.011
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author Reay, William R.
Geaghan, Michael P.
Atkins, Joshua R.
Carr, Vaughan J.
Green, Melissa J.
Cairns, Murray J.
author_facet Reay, William R.
Geaghan, Michael P.
Atkins, Joshua R.
Carr, Vaughan J.
Green, Melissa J.
Cairns, Murray J.
author_sort Reay, William R.
collection PubMed
description Genetically informed drug development and repurposing is an attractive prospect for improving patient outcomes in psychiatry; however, the effectiveness of these endeavors is confounded by heterogeneity. We propose an approach that links interventions implicated by disorder-associated genetic risk, at the population level, to a framework that can target these compounds to individuals. Specifically, results from genome-wide association studies are integrated with expression data to prioritize individual “directional anchor” genes for which the predicted risk-increasing direction of expression could be counteracted by an existing drug. While these compounds represent plausible therapeutic candidates, they are not likely to be equally efficacious for all individuals. To account for this heterogeneity, we constructed polygenic scores restricted to variants annotated to the network of genes that interact with each directional anchor gene. These metrics, which we call a pharmagenic enrichment score (PES), identify individuals with a higher burden of genetic risk, localized in biological processes related to the candidate drug target, to inform precision drug repurposing. We used this approach to investigate schizophrenia and bipolar disorder and reveal several compounds targeting specific directional anchor genes that could be plausibly repurposed. These genetic risk scores, mapped to the networks associated with target genes, revealed biological insights that cannot be observed in undifferentiated genome-wide polygenic risk score (PRS). For example, an enrichment of these partitioned scores in schizophrenia cases with otherwise low PRS. In summary, genetic risk could be used more specifically to direct drug repurposing candidates that target particular genes implicated in psychiatric and other complex disorders.
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spelling pubmed-95020602022-09-24 Genetics-informed precision treatment formulation in schizophrenia and bipolar disorder Reay, William R. Geaghan, Michael P. Atkins, Joshua R. Carr, Vaughan J. Green, Melissa J. Cairns, Murray J. Am J Hum Genet Article Genetically informed drug development and repurposing is an attractive prospect for improving patient outcomes in psychiatry; however, the effectiveness of these endeavors is confounded by heterogeneity. We propose an approach that links interventions implicated by disorder-associated genetic risk, at the population level, to a framework that can target these compounds to individuals. Specifically, results from genome-wide association studies are integrated with expression data to prioritize individual “directional anchor” genes for which the predicted risk-increasing direction of expression could be counteracted by an existing drug. While these compounds represent plausible therapeutic candidates, they are not likely to be equally efficacious for all individuals. To account for this heterogeneity, we constructed polygenic scores restricted to variants annotated to the network of genes that interact with each directional anchor gene. These metrics, which we call a pharmagenic enrichment score (PES), identify individuals with a higher burden of genetic risk, localized in biological processes related to the candidate drug target, to inform precision drug repurposing. We used this approach to investigate schizophrenia and bipolar disorder and reveal several compounds targeting specific directional anchor genes that could be plausibly repurposed. These genetic risk scores, mapped to the networks associated with target genes, revealed biological insights that cannot be observed in undifferentiated genome-wide polygenic risk score (PRS). For example, an enrichment of these partitioned scores in schizophrenia cases with otherwise low PRS. In summary, genetic risk could be used more specifically to direct drug repurposing candidates that target particular genes implicated in psychiatric and other complex disorders. Elsevier 2022-09-01 2022-09-01 /pmc/articles/PMC9502060/ /pubmed/36055211 http://dx.doi.org/10.1016/j.ajhg.2022.07.011 Text en © 2022 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Reay, William R.
Geaghan, Michael P.
Atkins, Joshua R.
Carr, Vaughan J.
Green, Melissa J.
Cairns, Murray J.
Genetics-informed precision treatment formulation in schizophrenia and bipolar disorder
title Genetics-informed precision treatment formulation in schizophrenia and bipolar disorder
title_full Genetics-informed precision treatment formulation in schizophrenia and bipolar disorder
title_fullStr Genetics-informed precision treatment formulation in schizophrenia and bipolar disorder
title_full_unstemmed Genetics-informed precision treatment formulation in schizophrenia and bipolar disorder
title_short Genetics-informed precision treatment formulation in schizophrenia and bipolar disorder
title_sort genetics-informed precision treatment formulation in schizophrenia and bipolar disorder
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9502060/
https://www.ncbi.nlm.nih.gov/pubmed/36055211
http://dx.doi.org/10.1016/j.ajhg.2022.07.011
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