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Modeling pK(a) of the Brønsted Bases as an Approach to the Gibbs Energy of the Proton in Acetonitrile

A simple but efficient computational approach to calculate pK(a) in acetonitrile for a set of phosphorus, nitrogen, and carbon bases was established. A linear function that describes relations between the calculated ΔG’(a.sol)(BH(+)) and pK(a) values was determined for each group of bases. The best...

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Autores principales: Glasovac, Zoran, Kovačević, Borislav
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9502073/
https://www.ncbi.nlm.nih.gov/pubmed/36142490
http://dx.doi.org/10.3390/ijms231810576
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author Glasovac, Zoran
Kovačević, Borislav
author_facet Glasovac, Zoran
Kovačević, Borislav
author_sort Glasovac, Zoran
collection PubMed
description A simple but efficient computational approach to calculate pK(a) in acetonitrile for a set of phosphorus, nitrogen, and carbon bases was established. A linear function that describes relations between the calculated ΔG’(a.sol)(BH(+)) and pK(a) values was determined for each group of bases. The best model was obtained through the variations in the basis set, in the level of theory (density functionals or MP2), and in the continuum solvation model (IPCM, CPCM, or SMD). The combination of the IPCM/B3LYP/6-311+G(d,p) solvation approach with MP2/6-311+G(2df,p)//B3LYP/6-31G(d) gas-phase energies provided very good results for all three groups of bases with R(2) values close to or above 0.99. Interestingly, the slopes and the intercepts of the obtained linear functions showed significant deviations from the theoretical values. We made a linear plot utilizing all the conducted calculations and all the structural variations and employed methods to prove the systematic nature of the intercept/slope dependence. The interpolation of the intercept to the ideal slope value enabled us to determine the Gibbs energy of the proton in acetonitrile, which amounted to −258.8 kcal mol(−1). The obtained value was in excellent agreement with previously published results.
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spelling pubmed-95020732022-09-24 Modeling pK(a) of the Brønsted Bases as an Approach to the Gibbs Energy of the Proton in Acetonitrile Glasovac, Zoran Kovačević, Borislav Int J Mol Sci Article A simple but efficient computational approach to calculate pK(a) in acetonitrile for a set of phosphorus, nitrogen, and carbon bases was established. A linear function that describes relations between the calculated ΔG’(a.sol)(BH(+)) and pK(a) values was determined for each group of bases. The best model was obtained through the variations in the basis set, in the level of theory (density functionals or MP2), and in the continuum solvation model (IPCM, CPCM, or SMD). The combination of the IPCM/B3LYP/6-311+G(d,p) solvation approach with MP2/6-311+G(2df,p)//B3LYP/6-31G(d) gas-phase energies provided very good results for all three groups of bases with R(2) values close to or above 0.99. Interestingly, the slopes and the intercepts of the obtained linear functions showed significant deviations from the theoretical values. We made a linear plot utilizing all the conducted calculations and all the structural variations and employed methods to prove the systematic nature of the intercept/slope dependence. The interpolation of the intercept to the ideal slope value enabled us to determine the Gibbs energy of the proton in acetonitrile, which amounted to −258.8 kcal mol(−1). The obtained value was in excellent agreement with previously published results. MDPI 2022-09-12 /pmc/articles/PMC9502073/ /pubmed/36142490 http://dx.doi.org/10.3390/ijms231810576 Text en © 2022 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Glasovac, Zoran
Kovačević, Borislav
Modeling pK(a) of the Brønsted Bases as an Approach to the Gibbs Energy of the Proton in Acetonitrile
title Modeling pK(a) of the Brønsted Bases as an Approach to the Gibbs Energy of the Proton in Acetonitrile
title_full Modeling pK(a) of the Brønsted Bases as an Approach to the Gibbs Energy of the Proton in Acetonitrile
title_fullStr Modeling pK(a) of the Brønsted Bases as an Approach to the Gibbs Energy of the Proton in Acetonitrile
title_full_unstemmed Modeling pK(a) of the Brønsted Bases as an Approach to the Gibbs Energy of the Proton in Acetonitrile
title_short Modeling pK(a) of the Brønsted Bases as an Approach to the Gibbs Energy of the Proton in Acetonitrile
title_sort modeling pk(a) of the brønsted bases as an approach to the gibbs energy of the proton in acetonitrile
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9502073/
https://www.ncbi.nlm.nih.gov/pubmed/36142490
http://dx.doi.org/10.3390/ijms231810576
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