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Analysis of N6-Methyladenosine RNA Methylation Regulators in Diagnosis and Distinct Molecular Subtypes of Ankylosing Spondylitis

The most frequent internal modification in eukaryotic mRNA is N6-methyladenosine (m6A). However, what we know about the m6A regulators in Ankylosing spondylitis (AS) is still limited. In our study, eight distinct m6A regulators were selected utilizing Differentially Expressed Gene (DEG) analysis of...

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Autores principales: Zhong, Cheng, Liang, Jia-hua, Chen, Zhen, Zhong, Li-ping, Sun, Guo-dong, Xie, Wei-xing, Wang, Dong-ping, Zhuang, Wen-de, Guo, Hao-hua, Jin, Da-xiang, Li, Yu-ming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9507730/
https://www.ncbi.nlm.nih.gov/pubmed/36157216
http://dx.doi.org/10.1155/2022/4942599
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author Zhong, Cheng
Liang, Jia-hua
Chen, Zhen
Zhong, Li-ping
Sun, Guo-dong
Xie, Wei-xing
Wang, Dong-ping
Zhuang, Wen-de
Guo, Hao-hua
Jin, Da-xiang
Li, Yu-ming
author_facet Zhong, Cheng
Liang, Jia-hua
Chen, Zhen
Zhong, Li-ping
Sun, Guo-dong
Xie, Wei-xing
Wang, Dong-ping
Zhuang, Wen-de
Guo, Hao-hua
Jin, Da-xiang
Li, Yu-ming
author_sort Zhong, Cheng
collection PubMed
description The most frequent internal modification in eukaryotic mRNA is N6-methyladenosine (m6A). However, what we know about the m6A regulators in Ankylosing spondylitis (AS) is still limited. In our study, eight distinct m6A regulators were selected utilizing Differentially Expressed Gene (DEG) analysis of the Gene Expression Omnibus GSE73754 dataset for making comparisons between AS (Ankylosing spondylitis) and non-AS patients. The random forest model and the nomogram model were used to screen the eight candidate m6A regulators and evaluate their prediction accuracy for the occurrence of AS. Furthermore, based on the selected m6A regulators, the AS patients were divided into two subgroups, and we applied principal component analysis algorithms to calculate their m6A score and evaluate the m6A patterns. Our findings revealed that patients in cluster A were linked to activated CD4 T cell immunity and activated CD8 T cell immunity. With its major contributions in the area of immunology, our research in m6A patterns may benefit the future diagnosis and treatment strategies of AS.
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spelling pubmed-95077302022-09-24 Analysis of N6-Methyladenosine RNA Methylation Regulators in Diagnosis and Distinct Molecular Subtypes of Ankylosing Spondylitis Zhong, Cheng Liang, Jia-hua Chen, Zhen Zhong, Li-ping Sun, Guo-dong Xie, Wei-xing Wang, Dong-ping Zhuang, Wen-de Guo, Hao-hua Jin, Da-xiang Li, Yu-ming Dis Markers Research Article The most frequent internal modification in eukaryotic mRNA is N6-methyladenosine (m6A). However, what we know about the m6A regulators in Ankylosing spondylitis (AS) is still limited. In our study, eight distinct m6A regulators were selected utilizing Differentially Expressed Gene (DEG) analysis of the Gene Expression Omnibus GSE73754 dataset for making comparisons between AS (Ankylosing spondylitis) and non-AS patients. The random forest model and the nomogram model were used to screen the eight candidate m6A regulators and evaluate their prediction accuracy for the occurrence of AS. Furthermore, based on the selected m6A regulators, the AS patients were divided into two subgroups, and we applied principal component analysis algorithms to calculate their m6A score and evaluate the m6A patterns. Our findings revealed that patients in cluster A were linked to activated CD4 T cell immunity and activated CD8 T cell immunity. With its major contributions in the area of immunology, our research in m6A patterns may benefit the future diagnosis and treatment strategies of AS. Hindawi 2022-09-16 /pmc/articles/PMC9507730/ /pubmed/36157216 http://dx.doi.org/10.1155/2022/4942599 Text en Copyright © 2022 Cheng Zhong et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Zhong, Cheng
Liang, Jia-hua
Chen, Zhen
Zhong, Li-ping
Sun, Guo-dong
Xie, Wei-xing
Wang, Dong-ping
Zhuang, Wen-de
Guo, Hao-hua
Jin, Da-xiang
Li, Yu-ming
Analysis of N6-Methyladenosine RNA Methylation Regulators in Diagnosis and Distinct Molecular Subtypes of Ankylosing Spondylitis
title Analysis of N6-Methyladenosine RNA Methylation Regulators in Diagnosis and Distinct Molecular Subtypes of Ankylosing Spondylitis
title_full Analysis of N6-Methyladenosine RNA Methylation Regulators in Diagnosis and Distinct Molecular Subtypes of Ankylosing Spondylitis
title_fullStr Analysis of N6-Methyladenosine RNA Methylation Regulators in Diagnosis and Distinct Molecular Subtypes of Ankylosing Spondylitis
title_full_unstemmed Analysis of N6-Methyladenosine RNA Methylation Regulators in Diagnosis and Distinct Molecular Subtypes of Ankylosing Spondylitis
title_short Analysis of N6-Methyladenosine RNA Methylation Regulators in Diagnosis and Distinct Molecular Subtypes of Ankylosing Spondylitis
title_sort analysis of n6-methyladenosine rna methylation regulators in diagnosis and distinct molecular subtypes of ankylosing spondylitis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9507730/
https://www.ncbi.nlm.nih.gov/pubmed/36157216
http://dx.doi.org/10.1155/2022/4942599
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