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Chemical shift assignments of calmodulin under standard conditions at neutral pH

The Ca(2+) sensor protein, calmodulin (CaM) is ubiquitously expressed in all cells where it binds to hundreds of different target proteins, including dozens of enzymes, receptors, ion channels and numerous Ca(2+) transporters. The only published NMR chemical shift assignments for Ca(2+)-bound CaM (i...

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Autores principales: Bej, Aritra, Ames, James B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Netherlands 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9510097/
https://www.ncbi.nlm.nih.gov/pubmed/35460468
http://dx.doi.org/10.1007/s12104-022-10082-7
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author Bej, Aritra
Ames, James B.
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Ames, James B.
author_sort Bej, Aritra
collection PubMed
description The Ca(2+) sensor protein, calmodulin (CaM) is ubiquitously expressed in all cells where it binds to hundreds of different target proteins, including dozens of enzymes, receptors, ion channels and numerous Ca(2+) transporters. The only published NMR chemical shift assignments for Ca(2+)-bound CaM (in the absence of a target) have been determined under acidic conditions: at pH 6.5/310 K (BMRB 6541) and pH 6.3/320 K (BMRB 547). However, some CaM/target complexes are not soluble under these conditions. Also, amide chemical shifts are very sensitive to pH and temperature, which can cause large baseline errors when using the existing chemical shift assignments of free CaM to calculate chemical shift perturbations caused by target binding at neutral pH and physiological temperature. We report complete NMR chemical shift assignments of Ca(2+)-saturated CaM under a set of standard conditions at neutral pH and 308 K that will enable more accurate chemical shift comparison between free CaM and CaM/target complexes (BMRB 51289).
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spelling pubmed-95100972022-09-27 Chemical shift assignments of calmodulin under standard conditions at neutral pH Bej, Aritra Ames, James B. Biomol NMR Assign Article The Ca(2+) sensor protein, calmodulin (CaM) is ubiquitously expressed in all cells where it binds to hundreds of different target proteins, including dozens of enzymes, receptors, ion channels and numerous Ca(2+) transporters. The only published NMR chemical shift assignments for Ca(2+)-bound CaM (in the absence of a target) have been determined under acidic conditions: at pH 6.5/310 K (BMRB 6541) and pH 6.3/320 K (BMRB 547). However, some CaM/target complexes are not soluble under these conditions. Also, amide chemical shifts are very sensitive to pH and temperature, which can cause large baseline errors when using the existing chemical shift assignments of free CaM to calculate chemical shift perturbations caused by target binding at neutral pH and physiological temperature. We report complete NMR chemical shift assignments of Ca(2+)-saturated CaM under a set of standard conditions at neutral pH and 308 K that will enable more accurate chemical shift comparison between free CaM and CaM/target complexes (BMRB 51289). Springer Netherlands 2022-04-23 2022 /pmc/articles/PMC9510097/ /pubmed/35460468 http://dx.doi.org/10.1007/s12104-022-10082-7 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visithttp://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/)
spellingShingle Article
Bej, Aritra
Ames, James B.
Chemical shift assignments of calmodulin under standard conditions at neutral pH
title Chemical shift assignments of calmodulin under standard conditions at neutral pH
title_full Chemical shift assignments of calmodulin under standard conditions at neutral pH
title_fullStr Chemical shift assignments of calmodulin under standard conditions at neutral pH
title_full_unstemmed Chemical shift assignments of calmodulin under standard conditions at neutral pH
title_short Chemical shift assignments of calmodulin under standard conditions at neutral pH
title_sort chemical shift assignments of calmodulin under standard conditions at neutral ph
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9510097/
https://www.ncbi.nlm.nih.gov/pubmed/35460468
http://dx.doi.org/10.1007/s12104-022-10082-7
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