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Flexible and high quality plant growth prediction with limited data
Predicting plant growth is a fundamental challenge that can be employed to analyze plants and further make decisions to have healthy plants with high yields. Deep learning has recently been showing its potential to address this challenge in recent years, however, there are still two issues. First, i...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9511019/ https://www.ncbi.nlm.nih.gov/pubmed/36172552 http://dx.doi.org/10.3389/fpls.2022.989304 |
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author | Meng, Yao Xu, Mingle Yoon, Sook Jeong, Yongchae Park, Dong Sun |
author_facet | Meng, Yao Xu, Mingle Yoon, Sook Jeong, Yongchae Park, Dong Sun |
author_sort | Meng, Yao |
collection | PubMed |
description | Predicting plant growth is a fundamental challenge that can be employed to analyze plants and further make decisions to have healthy plants with high yields. Deep learning has recently been showing its potential to address this challenge in recent years, however, there are still two issues. First, image-based plant growth prediction is currently taken either from time series or image generation viewpoints, resulting in a flexible learning framework and clear predictions, respectively. Second, deep learning-based algorithms are notorious to require a large-scale dataset to obtain a competing performance but collecting enough data is time-consuming and expensive. To address the issues, we consider the plant growth prediction from both viewpoints with two new time-series data augmentation algorithms. To be more specific, we raise a new framework with a length-changeable time-series processing unit to generate images flexibly. A generative adversarial loss is utilized to optimize our model to obtain high-quality images. Furthermore, we first recognize three key points to perform time-series data augmentation and then put forward T-Mixup and T-Copy-Paste. T-Mixup fuses images from a different time pixel-wise while T-Copy-Paste makes new time-series images with a different background by reusing individual leaves extracted from the existing dataset. We perform our method in a public dataset and achieve superior results, such as the generated RGB images and instance masks securing an average PSNR of 27.53 and 27.62, respectively, compared to the previously best 26.55 and 26.92. |
format | Online Article Text |
id | pubmed-9511019 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-95110192022-09-27 Flexible and high quality plant growth prediction with limited data Meng, Yao Xu, Mingle Yoon, Sook Jeong, Yongchae Park, Dong Sun Front Plant Sci Plant Science Predicting plant growth is a fundamental challenge that can be employed to analyze plants and further make decisions to have healthy plants with high yields. Deep learning has recently been showing its potential to address this challenge in recent years, however, there are still two issues. First, image-based plant growth prediction is currently taken either from time series or image generation viewpoints, resulting in a flexible learning framework and clear predictions, respectively. Second, deep learning-based algorithms are notorious to require a large-scale dataset to obtain a competing performance but collecting enough data is time-consuming and expensive. To address the issues, we consider the plant growth prediction from both viewpoints with two new time-series data augmentation algorithms. To be more specific, we raise a new framework with a length-changeable time-series processing unit to generate images flexibly. A generative adversarial loss is utilized to optimize our model to obtain high-quality images. Furthermore, we first recognize three key points to perform time-series data augmentation and then put forward T-Mixup and T-Copy-Paste. T-Mixup fuses images from a different time pixel-wise while T-Copy-Paste makes new time-series images with a different background by reusing individual leaves extracted from the existing dataset. We perform our method in a public dataset and achieve superior results, such as the generated RGB images and instance masks securing an average PSNR of 27.53 and 27.62, respectively, compared to the previously best 26.55 and 26.92. Frontiers Media S.A. 2022-09-12 /pmc/articles/PMC9511019/ /pubmed/36172552 http://dx.doi.org/10.3389/fpls.2022.989304 Text en Copyright © 2022 Meng, Xu, Yoon, Jeong and Park. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Plant Science Meng, Yao Xu, Mingle Yoon, Sook Jeong, Yongchae Park, Dong Sun Flexible and high quality plant growth prediction with limited data |
title | Flexible and high quality plant growth prediction with limited data |
title_full | Flexible and high quality plant growth prediction with limited data |
title_fullStr | Flexible and high quality plant growth prediction with limited data |
title_full_unstemmed | Flexible and high quality plant growth prediction with limited data |
title_short | Flexible and high quality plant growth prediction with limited data |
title_sort | flexible and high quality plant growth prediction with limited data |
topic | Plant Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9511019/ https://www.ncbi.nlm.nih.gov/pubmed/36172552 http://dx.doi.org/10.3389/fpls.2022.989304 |
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