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Clinical significance and potential mechanism of heat shock factor 1 in acute myeloid leukemia
Background: Heat shock factor 1 (HSF1) is now considered to have the potential to be used as a prognostic biomarker in cancers. However, its clinical significance and potential function in acute myeloid leukemia (AML) remain underexplored. Methods: In this study, the expression pattern and clinical...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Impact Journals
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9512492/ https://www.ncbi.nlm.nih.gov/pubmed/36069792 http://dx.doi.org/10.18632/aging.204267 |
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author | Lyu, Chunyi Wang, Qian Yin, Xuewei Li, Zonghong Wang, Teng Wang, Yan Cui, Siyuan Liu, Kui Wang, Zhenzhen Gao, Chang Xu, Ruirong |
author_facet | Lyu, Chunyi Wang, Qian Yin, Xuewei Li, Zonghong Wang, Teng Wang, Yan Cui, Siyuan Liu, Kui Wang, Zhenzhen Gao, Chang Xu, Ruirong |
author_sort | Lyu, Chunyi |
collection | PubMed |
description | Background: Heat shock factor 1 (HSF1) is now considered to have the potential to be used as a prognostic biomarker in cancers. However, its clinical significance and potential function in acute myeloid leukemia (AML) remain underexplored. Methods: In this study, the expression pattern and clinical significance of HSF1 in AML were examined by integrating data from databases including The Cancer Genome Atlas (TCGA), The Genotype–Tissue Expression (GTEx), Vizome, Cancer Cell Line Encyclopedia (CCLE) and Gene Expression Omnibus (GEO). Linkedomics was applied to collect HSF1–related genes in AML. GeneMANIA was applied to outline HSF1–related functional networks. CancerSEA analysis, Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis and Gene Set Enrichment Analysis (GSEA) were performed to mine the potential mechanism of HSF1 in leukemogenesis. Single–sample Gene Set Enrichment Analysis (ssGSEA) was applied to explore the correlation between HSF1 and infiltrating immune cells in AML. Results: HSF1 expression was elevated in AML compared to healthy controls and indicate a poor overall survival. HSF1 expression was significantly correlated with patients age, associated with patient survival in subgroup of bone marrow blasts (%) >20. Functional analyses indicated that HSF1 plays a role in the metastatic status of AML, and is involved in inflammation–related pathways and biological processes. HSF1 expression was significantly correlated with the immune infiltration of nature killer cells and T cell population. Conclusion: HSF1 plays a vital role in the molecular network of AML pathogenesis, and has the potential to be a biomarker for prognosis prediction. |
format | Online Article Text |
id | pubmed-9512492 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Impact Journals |
record_format | MEDLINE/PubMed |
spelling | pubmed-95124922022-09-28 Clinical significance and potential mechanism of heat shock factor 1 in acute myeloid leukemia Lyu, Chunyi Wang, Qian Yin, Xuewei Li, Zonghong Wang, Teng Wang, Yan Cui, Siyuan Liu, Kui Wang, Zhenzhen Gao, Chang Xu, Ruirong Aging (Albany NY) Research Paper Background: Heat shock factor 1 (HSF1) is now considered to have the potential to be used as a prognostic biomarker in cancers. However, its clinical significance and potential function in acute myeloid leukemia (AML) remain underexplored. Methods: In this study, the expression pattern and clinical significance of HSF1 in AML were examined by integrating data from databases including The Cancer Genome Atlas (TCGA), The Genotype–Tissue Expression (GTEx), Vizome, Cancer Cell Line Encyclopedia (CCLE) and Gene Expression Omnibus (GEO). Linkedomics was applied to collect HSF1–related genes in AML. GeneMANIA was applied to outline HSF1–related functional networks. CancerSEA analysis, Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis and Gene Set Enrichment Analysis (GSEA) were performed to mine the potential mechanism of HSF1 in leukemogenesis. Single–sample Gene Set Enrichment Analysis (ssGSEA) was applied to explore the correlation between HSF1 and infiltrating immune cells in AML. Results: HSF1 expression was elevated in AML compared to healthy controls and indicate a poor overall survival. HSF1 expression was significantly correlated with patients age, associated with patient survival in subgroup of bone marrow blasts (%) >20. Functional analyses indicated that HSF1 plays a role in the metastatic status of AML, and is involved in inflammation–related pathways and biological processes. HSF1 expression was significantly correlated with the immune infiltration of nature killer cells and T cell population. Conclusion: HSF1 plays a vital role in the molecular network of AML pathogenesis, and has the potential to be a biomarker for prognosis prediction. Impact Journals 2022-09-06 /pmc/articles/PMC9512492/ /pubmed/36069792 http://dx.doi.org/10.18632/aging.204267 Text en Copyright: © 2022 Lyu et al. https://creativecommons.org/licenses/by/3.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/3.0/) (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Paper Lyu, Chunyi Wang, Qian Yin, Xuewei Li, Zonghong Wang, Teng Wang, Yan Cui, Siyuan Liu, Kui Wang, Zhenzhen Gao, Chang Xu, Ruirong Clinical significance and potential mechanism of heat shock factor 1 in acute myeloid leukemia |
title | Clinical significance and potential mechanism of heat shock factor 1 in acute myeloid leukemia |
title_full | Clinical significance and potential mechanism of heat shock factor 1 in acute myeloid leukemia |
title_fullStr | Clinical significance and potential mechanism of heat shock factor 1 in acute myeloid leukemia |
title_full_unstemmed | Clinical significance and potential mechanism of heat shock factor 1 in acute myeloid leukemia |
title_short | Clinical significance and potential mechanism of heat shock factor 1 in acute myeloid leukemia |
title_sort | clinical significance and potential mechanism of heat shock factor 1 in acute myeloid leukemia |
topic | Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9512492/ https://www.ncbi.nlm.nih.gov/pubmed/36069792 http://dx.doi.org/10.18632/aging.204267 |
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