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Scaling relations for auxin waves

We analyze an ‘up-the-gradient’ model for the formation of transport channels of the phytohormone auxin, through auxin-mediated polarization of the PIN1 auxin transporter. We show that this model admits a family of travelling wave solutions that is parameterized by the height of the auxin-pulse. We...

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Autores principales: Bakker, Bente Hilde, Faver, Timothy E., Hupkes, Hermen Jan, Merks, Roeland M. H., van der Voort, Jelle
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer Berlin Heidelberg 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9512763/
https://www.ncbi.nlm.nih.gov/pubmed/36163567
http://dx.doi.org/10.1007/s00285-022-01793-5
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author Bakker, Bente Hilde
Faver, Timothy E.
Hupkes, Hermen Jan
Merks, Roeland M. H.
van der Voort, Jelle
author_facet Bakker, Bente Hilde
Faver, Timothy E.
Hupkes, Hermen Jan
Merks, Roeland M. H.
van der Voort, Jelle
author_sort Bakker, Bente Hilde
collection PubMed
description We analyze an ‘up-the-gradient’ model for the formation of transport channels of the phytohormone auxin, through auxin-mediated polarization of the PIN1 auxin transporter. We show that this model admits a family of travelling wave solutions that is parameterized by the height of the auxin-pulse. We uncover scaling relations for the speed and width of these waves and verify these rigorous results with numerical computations. In addition, we provide explicit expressions for the leading-order wave profiles, which allows the influence of the biological parameters in the problem to be readily identified. Our proofs are based on a generalization of the scaling principle developed by Friesecke and Pego to construct pulse solutions to the classic Fermi–Pasta–Ulam–Tsingou model, which describes a one-dimensional chain of coupled nonlinear springs. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00285-022-01793-5.
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spelling pubmed-95127632022-09-28 Scaling relations for auxin waves Bakker, Bente Hilde Faver, Timothy E. Hupkes, Hermen Jan Merks, Roeland M. H. van der Voort, Jelle J Math Biol Article We analyze an ‘up-the-gradient’ model for the formation of transport channels of the phytohormone auxin, through auxin-mediated polarization of the PIN1 auxin transporter. We show that this model admits a family of travelling wave solutions that is parameterized by the height of the auxin-pulse. We uncover scaling relations for the speed and width of these waves and verify these rigorous results with numerical computations. In addition, we provide explicit expressions for the leading-order wave profiles, which allows the influence of the biological parameters in the problem to be readily identified. Our proofs are based on a generalization of the scaling principle developed by Friesecke and Pego to construct pulse solutions to the classic Fermi–Pasta–Ulam–Tsingou model, which describes a one-dimensional chain of coupled nonlinear springs. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00285-022-01793-5. Springer Berlin Heidelberg 2022-09-26 2022 /pmc/articles/PMC9512763/ /pubmed/36163567 http://dx.doi.org/10.1007/s00285-022-01793-5 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Bakker, Bente Hilde
Faver, Timothy E.
Hupkes, Hermen Jan
Merks, Roeland M. H.
van der Voort, Jelle
Scaling relations for auxin waves
title Scaling relations for auxin waves
title_full Scaling relations for auxin waves
title_fullStr Scaling relations for auxin waves
title_full_unstemmed Scaling relations for auxin waves
title_short Scaling relations for auxin waves
title_sort scaling relations for auxin waves
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9512763/
https://www.ncbi.nlm.nih.gov/pubmed/36163567
http://dx.doi.org/10.1007/s00285-022-01793-5
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