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Scaling relations for auxin waves
We analyze an ‘up-the-gradient’ model for the formation of transport channels of the phytohormone auxin, through auxin-mediated polarization of the PIN1 auxin transporter. We show that this model admits a family of travelling wave solutions that is parameterized by the height of the auxin-pulse. We...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9512763/ https://www.ncbi.nlm.nih.gov/pubmed/36163567 http://dx.doi.org/10.1007/s00285-022-01793-5 |
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author | Bakker, Bente Hilde Faver, Timothy E. Hupkes, Hermen Jan Merks, Roeland M. H. van der Voort, Jelle |
author_facet | Bakker, Bente Hilde Faver, Timothy E. Hupkes, Hermen Jan Merks, Roeland M. H. van der Voort, Jelle |
author_sort | Bakker, Bente Hilde |
collection | PubMed |
description | We analyze an ‘up-the-gradient’ model for the formation of transport channels of the phytohormone auxin, through auxin-mediated polarization of the PIN1 auxin transporter. We show that this model admits a family of travelling wave solutions that is parameterized by the height of the auxin-pulse. We uncover scaling relations for the speed and width of these waves and verify these rigorous results with numerical computations. In addition, we provide explicit expressions for the leading-order wave profiles, which allows the influence of the biological parameters in the problem to be readily identified. Our proofs are based on a generalization of the scaling principle developed by Friesecke and Pego to construct pulse solutions to the classic Fermi–Pasta–Ulam–Tsingou model, which describes a one-dimensional chain of coupled nonlinear springs. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00285-022-01793-5. |
format | Online Article Text |
id | pubmed-9512763 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-95127632022-09-28 Scaling relations for auxin waves Bakker, Bente Hilde Faver, Timothy E. Hupkes, Hermen Jan Merks, Roeland M. H. van der Voort, Jelle J Math Biol Article We analyze an ‘up-the-gradient’ model for the formation of transport channels of the phytohormone auxin, through auxin-mediated polarization of the PIN1 auxin transporter. We show that this model admits a family of travelling wave solutions that is parameterized by the height of the auxin-pulse. We uncover scaling relations for the speed and width of these waves and verify these rigorous results with numerical computations. In addition, we provide explicit expressions for the leading-order wave profiles, which allows the influence of the biological parameters in the problem to be readily identified. Our proofs are based on a generalization of the scaling principle developed by Friesecke and Pego to construct pulse solutions to the classic Fermi–Pasta–Ulam–Tsingou model, which describes a one-dimensional chain of coupled nonlinear springs. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00285-022-01793-5. Springer Berlin Heidelberg 2022-09-26 2022 /pmc/articles/PMC9512763/ /pubmed/36163567 http://dx.doi.org/10.1007/s00285-022-01793-5 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Bakker, Bente Hilde Faver, Timothy E. Hupkes, Hermen Jan Merks, Roeland M. H. van der Voort, Jelle Scaling relations for auxin waves |
title | Scaling relations for auxin waves |
title_full | Scaling relations for auxin waves |
title_fullStr | Scaling relations for auxin waves |
title_full_unstemmed | Scaling relations for auxin waves |
title_short | Scaling relations for auxin waves |
title_sort | scaling relations for auxin waves |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9512763/ https://www.ncbi.nlm.nih.gov/pubmed/36163567 http://dx.doi.org/10.1007/s00285-022-01793-5 |
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