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RAS oncogenic activity predicts response to chemotherapy and outcome in lung adenocarcinoma

Activating mutations in KRAS occur in 32% of lung adenocarcinomas (LUAD). Despite leading to aggressive disease and resistance to therapy in preclinical studies, the KRAS mutation does not predict patient outcome or response to treatment, presumably due to additional events modulating RAS pathways....

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Autores principales: East, Philip, Kelly, Gavin P., Biswas, Dhruva, Marani, Michela, Hancock, David C., Creasy, Todd, Sachsenmeier, Kris, Swanton, Charles, Downward, Julian, de Carné Trécesson, Sophie
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9512813/
https://www.ncbi.nlm.nih.gov/pubmed/36163168
http://dx.doi.org/10.1038/s41467-022-33290-0
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author East, Philip
Kelly, Gavin P.
Biswas, Dhruva
Marani, Michela
Hancock, David C.
Creasy, Todd
Sachsenmeier, Kris
Swanton, Charles
Downward, Julian
de Carné Trécesson, Sophie
author_facet East, Philip
Kelly, Gavin P.
Biswas, Dhruva
Marani, Michela
Hancock, David C.
Creasy, Todd
Sachsenmeier, Kris
Swanton, Charles
Downward, Julian
de Carné Trécesson, Sophie
author_sort East, Philip
collection PubMed
description Activating mutations in KRAS occur in 32% of lung adenocarcinomas (LUAD). Despite leading to aggressive disease and resistance to therapy in preclinical studies, the KRAS mutation does not predict patient outcome or response to treatment, presumably due to additional events modulating RAS pathways. To obtain a broader measure of RAS pathway activation, we developed RAS84, a transcriptional signature optimised to capture RAS oncogenic activity in LUAD. We report evidence of RAS pathway oncogenic activation in 84% of LUAD, including 65% KRAS wild-type tumours, falling into four groups characterised by coincident alteration of STK11/LKB1, TP53 or CDKN2A, suggesting that the classifications developed when considering only KRAS mutant tumours have significance in a broader cohort of patients. Critically, high RAS activity patient groups show adverse clinical outcome and reduced response to chemotherapy. Patient stratification using oncogenic RAS transcriptional activity instead of genetic alterations could ultimately assist in clinical decision-making.
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spelling pubmed-95128132022-09-28 RAS oncogenic activity predicts response to chemotherapy and outcome in lung adenocarcinoma East, Philip Kelly, Gavin P. Biswas, Dhruva Marani, Michela Hancock, David C. Creasy, Todd Sachsenmeier, Kris Swanton, Charles Downward, Julian de Carné Trécesson, Sophie Nat Commun Article Activating mutations in KRAS occur in 32% of lung adenocarcinomas (LUAD). Despite leading to aggressive disease and resistance to therapy in preclinical studies, the KRAS mutation does not predict patient outcome or response to treatment, presumably due to additional events modulating RAS pathways. To obtain a broader measure of RAS pathway activation, we developed RAS84, a transcriptional signature optimised to capture RAS oncogenic activity in LUAD. We report evidence of RAS pathway oncogenic activation in 84% of LUAD, including 65% KRAS wild-type tumours, falling into four groups characterised by coincident alteration of STK11/LKB1, TP53 or CDKN2A, suggesting that the classifications developed when considering only KRAS mutant tumours have significance in a broader cohort of patients. Critically, high RAS activity patient groups show adverse clinical outcome and reduced response to chemotherapy. Patient stratification using oncogenic RAS transcriptional activity instead of genetic alterations could ultimately assist in clinical decision-making. Nature Publishing Group UK 2022-09-26 /pmc/articles/PMC9512813/ /pubmed/36163168 http://dx.doi.org/10.1038/s41467-022-33290-0 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
East, Philip
Kelly, Gavin P.
Biswas, Dhruva
Marani, Michela
Hancock, David C.
Creasy, Todd
Sachsenmeier, Kris
Swanton, Charles
Downward, Julian
de Carné Trécesson, Sophie
RAS oncogenic activity predicts response to chemotherapy and outcome in lung adenocarcinoma
title RAS oncogenic activity predicts response to chemotherapy and outcome in lung adenocarcinoma
title_full RAS oncogenic activity predicts response to chemotherapy and outcome in lung adenocarcinoma
title_fullStr RAS oncogenic activity predicts response to chemotherapy and outcome in lung adenocarcinoma
title_full_unstemmed RAS oncogenic activity predicts response to chemotherapy and outcome in lung adenocarcinoma
title_short RAS oncogenic activity predicts response to chemotherapy and outcome in lung adenocarcinoma
title_sort ras oncogenic activity predicts response to chemotherapy and outcome in lung adenocarcinoma
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9512813/
https://www.ncbi.nlm.nih.gov/pubmed/36163168
http://dx.doi.org/10.1038/s41467-022-33290-0
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