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RAS oncogenic activity predicts response to chemotherapy and outcome in lung adenocarcinoma
Activating mutations in KRAS occur in 32% of lung adenocarcinomas (LUAD). Despite leading to aggressive disease and resistance to therapy in preclinical studies, the KRAS mutation does not predict patient outcome or response to treatment, presumably due to additional events modulating RAS pathways....
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9512813/ https://www.ncbi.nlm.nih.gov/pubmed/36163168 http://dx.doi.org/10.1038/s41467-022-33290-0 |
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author | East, Philip Kelly, Gavin P. Biswas, Dhruva Marani, Michela Hancock, David C. Creasy, Todd Sachsenmeier, Kris Swanton, Charles Downward, Julian de Carné Trécesson, Sophie |
author_facet | East, Philip Kelly, Gavin P. Biswas, Dhruva Marani, Michela Hancock, David C. Creasy, Todd Sachsenmeier, Kris Swanton, Charles Downward, Julian de Carné Trécesson, Sophie |
author_sort | East, Philip |
collection | PubMed |
description | Activating mutations in KRAS occur in 32% of lung adenocarcinomas (LUAD). Despite leading to aggressive disease and resistance to therapy in preclinical studies, the KRAS mutation does not predict patient outcome or response to treatment, presumably due to additional events modulating RAS pathways. To obtain a broader measure of RAS pathway activation, we developed RAS84, a transcriptional signature optimised to capture RAS oncogenic activity in LUAD. We report evidence of RAS pathway oncogenic activation in 84% of LUAD, including 65% KRAS wild-type tumours, falling into four groups characterised by coincident alteration of STK11/LKB1, TP53 or CDKN2A, suggesting that the classifications developed when considering only KRAS mutant tumours have significance in a broader cohort of patients. Critically, high RAS activity patient groups show adverse clinical outcome and reduced response to chemotherapy. Patient stratification using oncogenic RAS transcriptional activity instead of genetic alterations could ultimately assist in clinical decision-making. |
format | Online Article Text |
id | pubmed-9512813 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-95128132022-09-28 RAS oncogenic activity predicts response to chemotherapy and outcome in lung adenocarcinoma East, Philip Kelly, Gavin P. Biswas, Dhruva Marani, Michela Hancock, David C. Creasy, Todd Sachsenmeier, Kris Swanton, Charles Downward, Julian de Carné Trécesson, Sophie Nat Commun Article Activating mutations in KRAS occur in 32% of lung adenocarcinomas (LUAD). Despite leading to aggressive disease and resistance to therapy in preclinical studies, the KRAS mutation does not predict patient outcome or response to treatment, presumably due to additional events modulating RAS pathways. To obtain a broader measure of RAS pathway activation, we developed RAS84, a transcriptional signature optimised to capture RAS oncogenic activity in LUAD. We report evidence of RAS pathway oncogenic activation in 84% of LUAD, including 65% KRAS wild-type tumours, falling into four groups characterised by coincident alteration of STK11/LKB1, TP53 or CDKN2A, suggesting that the classifications developed when considering only KRAS mutant tumours have significance in a broader cohort of patients. Critically, high RAS activity patient groups show adverse clinical outcome and reduced response to chemotherapy. Patient stratification using oncogenic RAS transcriptional activity instead of genetic alterations could ultimately assist in clinical decision-making. Nature Publishing Group UK 2022-09-26 /pmc/articles/PMC9512813/ /pubmed/36163168 http://dx.doi.org/10.1038/s41467-022-33290-0 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article East, Philip Kelly, Gavin P. Biswas, Dhruva Marani, Michela Hancock, David C. Creasy, Todd Sachsenmeier, Kris Swanton, Charles Downward, Julian de Carné Trécesson, Sophie RAS oncogenic activity predicts response to chemotherapy and outcome in lung adenocarcinoma |
title | RAS oncogenic activity predicts response to chemotherapy and outcome in lung adenocarcinoma |
title_full | RAS oncogenic activity predicts response to chemotherapy and outcome in lung adenocarcinoma |
title_fullStr | RAS oncogenic activity predicts response to chemotherapy and outcome in lung adenocarcinoma |
title_full_unstemmed | RAS oncogenic activity predicts response to chemotherapy and outcome in lung adenocarcinoma |
title_short | RAS oncogenic activity predicts response to chemotherapy and outcome in lung adenocarcinoma |
title_sort | ras oncogenic activity predicts response to chemotherapy and outcome in lung adenocarcinoma |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9512813/ https://www.ncbi.nlm.nih.gov/pubmed/36163168 http://dx.doi.org/10.1038/s41467-022-33290-0 |
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