Cargando…

Minimum standards for evaluating machine-learned models of high-dimensional data

The maturation of machine learning and technologies that generate high dimensional data have led to the growth in the number of predictive models, such as the “epigenetic clock”. While powerful, machine learning algorithms run a high risk of overfitting, particularly when training data is limited, a...

Descripción completa

Detalles Bibliográficos
Autor principal: Chen, Brian H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9513121/
https://www.ncbi.nlm.nih.gov/pubmed/36176975
http://dx.doi.org/10.3389/fragi.2022.901841
_version_ 1784797985521008640
author Chen, Brian H.
author_facet Chen, Brian H.
author_sort Chen, Brian H.
collection PubMed
description The maturation of machine learning and technologies that generate high dimensional data have led to the growth in the number of predictive models, such as the “epigenetic clock”. While powerful, machine learning algorithms run a high risk of overfitting, particularly when training data is limited, as is often the case with high-dimensional data (“large p, small n”). Making independent validation a requirement of “algorithmic biomarker” development would bring greater clarity to the field by more efficiently identifying prediction or classification models to prioritize for further validation and characterization. Reproducibility has been a mainstay in science, but only recently received attention in defining its various aspects and how to apply these principles to machine learning models. The goal of this paper is merely to serve as a call-to-arms for greater rigor and attention paid to newly developed models for prediction or classification.
format Online
Article
Text
id pubmed-9513121
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-95131212022-09-28 Minimum standards for evaluating machine-learned models of high-dimensional data Chen, Brian H. Front Aging Aging The maturation of machine learning and technologies that generate high dimensional data have led to the growth in the number of predictive models, such as the “epigenetic clock”. While powerful, machine learning algorithms run a high risk of overfitting, particularly when training data is limited, as is often the case with high-dimensional data (“large p, small n”). Making independent validation a requirement of “algorithmic biomarker” development would bring greater clarity to the field by more efficiently identifying prediction or classification models to prioritize for further validation and characterization. Reproducibility has been a mainstay in science, but only recently received attention in defining its various aspects and how to apply these principles to machine learning models. The goal of this paper is merely to serve as a call-to-arms for greater rigor and attention paid to newly developed models for prediction or classification. Frontiers Media S.A. 2022-09-13 /pmc/articles/PMC9513121/ /pubmed/36176975 http://dx.doi.org/10.3389/fragi.2022.901841 Text en Copyright © 2022 Chen. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Aging
Chen, Brian H.
Minimum standards for evaluating machine-learned models of high-dimensional data
title Minimum standards for evaluating machine-learned models of high-dimensional data
title_full Minimum standards for evaluating machine-learned models of high-dimensional data
title_fullStr Minimum standards for evaluating machine-learned models of high-dimensional data
title_full_unstemmed Minimum standards for evaluating machine-learned models of high-dimensional data
title_short Minimum standards for evaluating machine-learned models of high-dimensional data
title_sort minimum standards for evaluating machine-learned models of high-dimensional data
topic Aging
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9513121/
https://www.ncbi.nlm.nih.gov/pubmed/36176975
http://dx.doi.org/10.3389/fragi.2022.901841
work_keys_str_mv AT chenbrianh minimumstandardsforevaluatingmachinelearnedmodelsofhighdimensionaldata