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Simple statistical models can be sufficient for testing hypotheses with population time‐series data

Time‐series data offer wide‐ranging opportunities to test hypotheses about the physical and biological factors that influence species abundances. Although sophisticated models have been developed and applied to analyze abundance time series, they require information about species detectability that...

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Autores principales: Wenger, Seth J., Stowe, Edward S., Gido, Keith B., Freeman, Mary C., Kanno, Yoichiro, Franssen, Nathan R., Olden, Julian D., Poff, N. LeRoy, Walters, Annika W., Bumpers, Phillip M., Mims, Meryl C., Hooten, Mevin B., Lu, Xinyi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9514214/
https://www.ncbi.nlm.nih.gov/pubmed/36188518
http://dx.doi.org/10.1002/ece3.9339
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author Wenger, Seth J.
Stowe, Edward S.
Gido, Keith B.
Freeman, Mary C.
Kanno, Yoichiro
Franssen, Nathan R.
Olden, Julian D.
Poff, N. LeRoy
Walters, Annika W.
Bumpers, Phillip M.
Mims, Meryl C.
Hooten, Mevin B.
Lu, Xinyi
author_facet Wenger, Seth J.
Stowe, Edward S.
Gido, Keith B.
Freeman, Mary C.
Kanno, Yoichiro
Franssen, Nathan R.
Olden, Julian D.
Poff, N. LeRoy
Walters, Annika W.
Bumpers, Phillip M.
Mims, Meryl C.
Hooten, Mevin B.
Lu, Xinyi
author_sort Wenger, Seth J.
collection PubMed
description Time‐series data offer wide‐ranging opportunities to test hypotheses about the physical and biological factors that influence species abundances. Although sophisticated models have been developed and applied to analyze abundance time series, they require information about species detectability that is often unavailable. We propose that in many cases, simpler models are adequate for testing hypotheses. We consider three relatively simple regression models for time series, using simulated and empirical (fish and mammal) datasets. Model A is a conventional generalized linear model of abundance, model B adds a temporal autoregressive term, and model C uses an estimate of population growth rate as a response variable, with the option of including a term for density dependence. All models can be fit using Bayesian and non‐Bayesian methods. Simulation results demonstrated that model C tended to have greater support for long‐lived, lower‐fecundity organisms (K life‐history strategists), while model A, the simplest, tended to be supported for shorter‐lived, high‐fecundity organisms (r life‐history strategists). Analysis of real‐world fish and mammal datasets found that models A, B, and C each enjoyed support for at least some species, but sometimes yielded different insights. In particular, model C indicated effects of predictor variables that were not evident in analyses with models A and B. Bayesian and frequentist models yielded similar parameter estimates and performance. We conclude that relatively simple models are useful for testing hypotheses about the factors that influence abundance in time‐series data, and can be appropriate choices for datasets that lack the information needed to fit more complicated models. When feasible, we advise fitting datasets with multiple models because they can provide complementary information.
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spelling pubmed-95142142022-09-30 Simple statistical models can be sufficient for testing hypotheses with population time‐series data Wenger, Seth J. Stowe, Edward S. Gido, Keith B. Freeman, Mary C. Kanno, Yoichiro Franssen, Nathan R. Olden, Julian D. Poff, N. LeRoy Walters, Annika W. Bumpers, Phillip M. Mims, Meryl C. Hooten, Mevin B. Lu, Xinyi Ecol Evol Research Articles Time‐series data offer wide‐ranging opportunities to test hypotheses about the physical and biological factors that influence species abundances. Although sophisticated models have been developed and applied to analyze abundance time series, they require information about species detectability that is often unavailable. We propose that in many cases, simpler models are adequate for testing hypotheses. We consider three relatively simple regression models for time series, using simulated and empirical (fish and mammal) datasets. Model A is a conventional generalized linear model of abundance, model B adds a temporal autoregressive term, and model C uses an estimate of population growth rate as a response variable, with the option of including a term for density dependence. All models can be fit using Bayesian and non‐Bayesian methods. Simulation results demonstrated that model C tended to have greater support for long‐lived, lower‐fecundity organisms (K life‐history strategists), while model A, the simplest, tended to be supported for shorter‐lived, high‐fecundity organisms (r life‐history strategists). Analysis of real‐world fish and mammal datasets found that models A, B, and C each enjoyed support for at least some species, but sometimes yielded different insights. In particular, model C indicated effects of predictor variables that were not evident in analyses with models A and B. Bayesian and frequentist models yielded similar parameter estimates and performance. We conclude that relatively simple models are useful for testing hypotheses about the factors that influence abundance in time‐series data, and can be appropriate choices for datasets that lack the information needed to fit more complicated models. When feasible, we advise fitting datasets with multiple models because they can provide complementary information. John Wiley and Sons Inc. 2022-09-27 /pmc/articles/PMC9514214/ /pubmed/36188518 http://dx.doi.org/10.1002/ece3.9339 Text en © 2022 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Wenger, Seth J.
Stowe, Edward S.
Gido, Keith B.
Freeman, Mary C.
Kanno, Yoichiro
Franssen, Nathan R.
Olden, Julian D.
Poff, N. LeRoy
Walters, Annika W.
Bumpers, Phillip M.
Mims, Meryl C.
Hooten, Mevin B.
Lu, Xinyi
Simple statistical models can be sufficient for testing hypotheses with population time‐series data
title Simple statistical models can be sufficient for testing hypotheses with population time‐series data
title_full Simple statistical models can be sufficient for testing hypotheses with population time‐series data
title_fullStr Simple statistical models can be sufficient for testing hypotheses with population time‐series data
title_full_unstemmed Simple statistical models can be sufficient for testing hypotheses with population time‐series data
title_short Simple statistical models can be sufficient for testing hypotheses with population time‐series data
title_sort simple statistical models can be sufficient for testing hypotheses with population time‐series data
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9514214/
https://www.ncbi.nlm.nih.gov/pubmed/36188518
http://dx.doi.org/10.1002/ece3.9339
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