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Modelling the strength of mineral–organic binding: organic molecules on the α-Al(2)O(3)(0001) surface
Organic carbon (OC) is an essential component of soil. Sorption of OC to oxide mineral surfaces is a key process in soil preservation due to its ability to protect OC from microbial degradation. To understand the sorption of OC in soils and obtain a quantitative description of the binding of organic...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Royal Society of Chemistry
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9514380/ https://www.ncbi.nlm.nih.gov/pubmed/36276046 http://dx.doi.org/10.1039/d2ra04742j |
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author | Ahmad, Aneesa Martsinovich, Natalia |
author_facet | Ahmad, Aneesa Martsinovich, Natalia |
author_sort | Ahmad, Aneesa |
collection | PubMed |
description | Organic carbon (OC) is an essential component of soil. Sorption of OC to oxide mineral surfaces is a key process in soil preservation due to its ability to protect OC from microbial degradation. To understand the sorption of OC in soils and obtain a quantitative description of the binding of organic molecules to soil minerals, we investigated the binding of water and small organic molecules, typical building blocks of OC, on α-Al(2)O(3), a common soil mineral. α-Al(2)O(3) was modelled using (0001)-oriented periodic slabs, using density functional theory calculations with empirical dispersion correction. For water, dissociative adsorption was energetically preferred to molecular adsorption. Amine, amide and carboxylic acid functional groups were found to bind more strongly to this surface compared to water. Alcohol, ether, thiol and ester functional groups had adsorption energies very similar to that of water, while hydrocarbons were found to bind less strongly. Carboxylic acids were the strongest bound surface adsorbates in this study. Dissociated adsorption configurations (where allowed by the molecules' chemical nature) were usually more favourable than molecular adsorption. Hydrogen bonding was found to be a major contributor to the stability of adsorption configurations. This work shows that a number of organic functional groups, in particular amine, amide and carboxylic acids, bind to the α-Al(2)O(3)(0001) surface more strongly than water; thus they are likely to be adsorbed on this mineral surface under ambient conditions and to provide stability of adsorbed OC. |
format | Online Article Text |
id | pubmed-9514380 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | The Royal Society of Chemistry |
record_format | MEDLINE/PubMed |
spelling | pubmed-95143802022-10-21 Modelling the strength of mineral–organic binding: organic molecules on the α-Al(2)O(3)(0001) surface Ahmad, Aneesa Martsinovich, Natalia RSC Adv Chemistry Organic carbon (OC) is an essential component of soil. Sorption of OC to oxide mineral surfaces is a key process in soil preservation due to its ability to protect OC from microbial degradation. To understand the sorption of OC in soils and obtain a quantitative description of the binding of organic molecules to soil minerals, we investigated the binding of water and small organic molecules, typical building blocks of OC, on α-Al(2)O(3), a common soil mineral. α-Al(2)O(3) was modelled using (0001)-oriented periodic slabs, using density functional theory calculations with empirical dispersion correction. For water, dissociative adsorption was energetically preferred to molecular adsorption. Amine, amide and carboxylic acid functional groups were found to bind more strongly to this surface compared to water. Alcohol, ether, thiol and ester functional groups had adsorption energies very similar to that of water, while hydrocarbons were found to bind less strongly. Carboxylic acids were the strongest bound surface adsorbates in this study. Dissociated adsorption configurations (where allowed by the molecules' chemical nature) were usually more favourable than molecular adsorption. Hydrogen bonding was found to be a major contributor to the stability of adsorption configurations. This work shows that a number of organic functional groups, in particular amine, amide and carboxylic acids, bind to the α-Al(2)O(3)(0001) surface more strongly than water; thus they are likely to be adsorbed on this mineral surface under ambient conditions and to provide stability of adsorbed OC. The Royal Society of Chemistry 2022-09-27 /pmc/articles/PMC9514380/ /pubmed/36276046 http://dx.doi.org/10.1039/d2ra04742j Text en This journal is © The Royal Society of Chemistry https://creativecommons.org/licenses/by/3.0/ |
spellingShingle | Chemistry Ahmad, Aneesa Martsinovich, Natalia Modelling the strength of mineral–organic binding: organic molecules on the α-Al(2)O(3)(0001) surface |
title | Modelling the strength of mineral–organic binding: organic molecules on the α-Al(2)O(3)(0001) surface |
title_full | Modelling the strength of mineral–organic binding: organic molecules on the α-Al(2)O(3)(0001) surface |
title_fullStr | Modelling the strength of mineral–organic binding: organic molecules on the α-Al(2)O(3)(0001) surface |
title_full_unstemmed | Modelling the strength of mineral–organic binding: organic molecules on the α-Al(2)O(3)(0001) surface |
title_short | Modelling the strength of mineral–organic binding: organic molecules on the α-Al(2)O(3)(0001) surface |
title_sort | modelling the strength of mineral–organic binding: organic molecules on the α-al(2)o(3)(0001) surface |
topic | Chemistry |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9514380/ https://www.ncbi.nlm.nih.gov/pubmed/36276046 http://dx.doi.org/10.1039/d2ra04742j |
work_keys_str_mv | AT ahmadaneesa modellingthestrengthofmineralorganicbindingorganicmoleculesontheaal2o30001surface AT martsinovichnatalia modellingthestrengthofmineralorganicbindingorganicmoleculesontheaal2o30001surface |