Cargando…

Development and characterization of microsatellite primers for Triops granarius (Branchiopoda: Notostraca) using MiSeq technology

BACKGROUND: Next-generation sequencing technology has allowed for the rapid development of microsatellites, neutral polymorphic markers that can be used for the analysis of population structure. METHODS AND RESULTS: In this study, we performed whole-genome sequencing using the Illumina MiSeq system...

Descripción completa

Detalles Bibliográficos
Autores principales:	Ahmed, Lina, Al-Najjar, Yousef, Cramer, Emily R. A., Thareja, Gaurav, Suhre, Karsten, Chen, Kuei-Chiu
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Springer Netherlands 2022
Materias:	Short Communication
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9515016/ https://www.ncbi.nlm.nih.gov/pubmed/36057875 http://dx.doi.org/10.1007/s11033-022-07804-4

Ejemplares similares

Discriminating between the Effects of Founding Events and Reproductive Mode on the Genetic Structure of Triops Populations (Branchiopoda: Notostraca)
por: Horn, Rebekah L., et al.
Publicado: (2014)

Ecology and distribution of large branchiopods (Crustacea, Branchiopoda, Anostraca, Notostraca, Laevicaudata, Spinicaudata) of the Eastern Cape Karoo, South Africa
por: Mabidi, Annah, et al.
Publicado: (2016)

Characterization of 13 microsatellite markers for Calochortus gunnisonii (Liliaceae) from Illumina MiSeq sequencing(1)
por: Fuller, Ryan S., et al.
Publicado: (2015)

Characterization of microsatellite markers for pinedrops, Pterospora andromedea (Ericaceae), from Illumina MiSeq sequencing(1)
por: Grubisha, Lisa C., et al.
Publicado: (2014)

Development of microsatellite markers using Illumina MiSeq sequencing to characterize Ephedra gerardiana (Ephedraceae)(1)
por: De, Ji, et al.
Publicado: (2017)

Toward a Global Phylogeny of the “Living Fossil" Crustacean Order of the Notostraca
por: Vanschoenwinkel, Bram, et al.
Publicado: (2012)

Conflicts in Mitochondrial Phylogenomics of Branchiopoda, with the First Complete Mitogenome of Laevicaudata (Crustacea: Branchiopoda)
por: Sun, Xiaoyan, et al.
Publicado: (2023)

Development and characterization of 43 microsatellite markers for the critically endangered primrose Primula reinii using MiSeq sequencing
por: Yamamoto, Masaya, et al.
Publicado: (2017)

Optimisation of methods for bacterial skin microbiome investigation: primer selection and comparison of the 454 versus MiSeq platform
por: Castelino, Madhura, et al.
Publicado: (2017)

Characterization of 24 microsatellite markers in Primula chungensis (Primulaceae), a distylous–homostylous species, using MiSeq sequencing
por: Zhou, Wei, et al.
Publicado: (2016)

Isolation and characterization of 21 polymorphic microsatellite loci for the rockpool shrimp Palaemon elegans using Illumina MiSeq sequencing
por: González-Castellano, Inés, et al.
Publicado: (2018)

Isolation and characterization of novel microsatellite loci for the Eastern Pacific marine sponge Mycale cecilia by Illumina MiSeq sequencing
por: Hernández-Lozano, Misha Yazmín, et al.
Publicado: (2023)

Recent evolution of alternative reproductive modes in the 'living fossil' Triops cancriformis
por: Zierold, Thorid, et al.
Publicado: (2007)

Toxic Relationships: Prediction of TBT’s Affinity to the Ecdysteroid Receptor of Triops longicaudatus
por: Ferreira, Nuno Gonçalo de Carvalho, et al.
Publicado: (2023)

Evaluation of the reproducibility of amplicon sequencing with Illumina MiSeq platform
por: Wen, Chongqing, et al.
Publicado: (2017)

Transition in sexual system and sex chromosome evolution in the tadpole shrimp Triops cancriformis
por: Mathers, T C, et al.
Publicado: (2015)

A new molecular diagnostic tool for surveying and monitoring Triops cancriformis populations
por: Sellers, Graham S., et al.
Publicado: (2017)

Mitochondrial genome diversity and evolution in Branchiopoda (Crustacea)
por: Luchetti, Andrea, et al.
Publicado: (2019)

Diversity and distribution of the cladocerans (Crustacea, Branchiopoda) in Thailand
por: Choedchim, Wijittra, et al.
Publicado: (2023)

Illumina MiSeq sequencing analysis of fungal diversity in stored dates
por: Al-Bulushi, Ismail M., et al.
Publicado: (2017)

Perspectives of using Illumina MiSeq for identification of arbuscular mycorrhizal fungi
por: Kryukov, A.A., et al.
Publicado: (2020)

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms
por: Caporaso, J Gregory, et al.
Publicado: (2012)

Insecticidal Activity of 25 Essential Oils on the Stored Product Pest, Sitophilus granarius
por: Demeter, Sébastien, et al.
Publicado: (2021)

Bioactivity of Wild Hop Extracts against the Granary Weevil, Sitophilus granarius (L.)
por: Paventi, Gianluca, et al.
Publicado: (2021)

Cost-efficient high-throughput HLA typing by MiSeq amplicon sequencing
por: Lange, Vinzenz, et al.
Publicado: (2014)

Insight into biases and sequencing errors for amplicon sequencing with the Illumina MiSeq platform
por: Schirmer, Melanie, et al.
Publicado: (2015)

Fast and Simple Analysis of MiSeq Amplicon Sequencing Data with MetaAmp
por: Dong, Xiaoli, et al.
Publicado: (2017)

Mitochondrial genome sequencing with short overlapping amplicons on MiSeq FGx system
por: Xin, Yang, et al.
Publicado: (2021)

Investigation on the genetic-inconsistent paternity cases using the MiSeq FGx system
por: Chen, Anqi, et al.
Publicado: (2022)

Development and characterization of 26 novel microsatellite loci for the trochid gastropod Gibbula divaricata (Linnaeus, 1758), using Illumina MiSeq next generation sequencing technology
por: López-Márquez, Violeta, et al.
Publicado: (2016)

Identification, expression, and molecular evolution of microRNAs in the “living fossil” Triops cancriformis (tadpole shrimp)
por: Ikeda, Kahori T., et al.
Publicado: (2015)

Illumina iSeq 100 and MiSeq exhibit similar performance in freshwater fish environmental DNA metabarcoding
por: Nakao, Ryohei, et al.
Publicado: (2021)

Bioactivity of Cereal- and Legume-Based Macaroni Pasta Volatiles to Adult Sitophilus granarius (L.)
por: Trematerra, Pasquale, et al.
Publicado: (2021)

Acceptance and utilization efficiency of a purple durum wheat genotype by Sitophilus granarius (L.)
por: D’Isita, Ilaria, et al.
Publicado: (2023)

Quasispecies Analyses of the HIV-1 Near-full-length Genome With Illumina MiSeq
por: Ode, Hirotaka, et al.
Publicado: (2015)

Illumina MiSeq sequencing disfavours a sequence motif in the GFP reporter gene
por: Van den Hoecke, Silvie, et al.
Publicado: (2016)

Diversity and Variation of Bacterial Community Revealed by MiSeq Sequencing in Chinese Dark Teas
por: Fu, Jianyu, et al.
Publicado: (2016)

Qualitative and quantitative assessment of Illumina’s forensic STR and SNP kits on MiSeq FGx™
por: Sharma, Vishakha, et al.
Publicado: (2017)

Gut microbial profile analysis by MiSeq sequencing of pancreatic carcinoma patients in China
por: Ren, Zhigang, et al.
Publicado: (2017)

Whole-Genome Sequencing of Porcine Epidemic Diarrhea Virus by Illumina MiSeq Platform
por: Wang, Leyi, et al.
Publicado: (2015)

Cannot write session to /tmp/vufind_sessions/sess_2rppshisedv4h35pk8sa90iinb