Cargando…

Common variants in GNL3 gene contributed the susceptibility of hand osteoarthritis in Han Chinese population

Osteoarthritis (OA) is one of the most popular degenerative joint diseases. The nucleolar GTP binding protein 3 (GNL3) gene encodes guanine nucleotide binding protein-like 3, which is related in cell proliferation, differentiation, and cell cycle regulation. Our study aimed to examine the contributi...

Descripción completa

Detalles Bibliográficos
Autores principales: Wang, Xi, Xiao, Lin, Wang, Zhiyuan, Zhi, Liqiang, Li, Qiang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9515075/
https://www.ncbi.nlm.nih.gov/pubmed/36167888
http://dx.doi.org/10.1038/s41598-022-20287-4
_version_ 1784798412289343488
author Wang, Xi
Xiao, Lin
Wang, Zhiyuan
Zhi, Liqiang
Li, Qiang
author_facet Wang, Xi
Xiao, Lin
Wang, Zhiyuan
Zhi, Liqiang
Li, Qiang
author_sort Wang, Xi
collection PubMed
description Osteoarthritis (OA) is one of the most popular degenerative joint diseases. The nucleolar GTP binding protein 3 (GNL3) gene encodes guanine nucleotide binding protein-like 3, which is related in cell proliferation, differentiation, and cell cycle regulation. Our study aimed to examine the contribution of GNL3 gene polymorphisms to the risk of hand OA and its related clinical features. A total of 3387 study participants including 1160 patients with hand OA and 2227 controls were recruited in this study. Eleven SNPs in GNL3 gene were selected for genotyping. Genetic association signals were examined using Plink. Relationships between significant SNPs and clinical features of hand OA were also explored. SNP rs11177 was found to be strongly associated with susceptibility of hand OA (P = 4.32 × 10(–5)). The minor allele of rs11177 was associated with increased susceptibility of hand OA. In addition, significant associations were also identified between genotypes of rs11177 and clinical features of hand OA patients including K-L grade (P < 0.01) and categorized pain scores (P < 0.01). Significant eQTL signals for rs11177 on GNL3 in multiple types of human tissues were also identified in GTEx database. Our results have established the link between GNL3 gene and susceptibility of hand OA.
format Online
Article
Text
id pubmed-9515075
institution National Center for Biotechnology Information
language English
publishDate 2022
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-95150752022-09-29 Common variants in GNL3 gene contributed the susceptibility of hand osteoarthritis in Han Chinese population Wang, Xi Xiao, Lin Wang, Zhiyuan Zhi, Liqiang Li, Qiang Sci Rep Article Osteoarthritis (OA) is one of the most popular degenerative joint diseases. The nucleolar GTP binding protein 3 (GNL3) gene encodes guanine nucleotide binding protein-like 3, which is related in cell proliferation, differentiation, and cell cycle regulation. Our study aimed to examine the contribution of GNL3 gene polymorphisms to the risk of hand OA and its related clinical features. A total of 3387 study participants including 1160 patients with hand OA and 2227 controls were recruited in this study. Eleven SNPs in GNL3 gene were selected for genotyping. Genetic association signals were examined using Plink. Relationships between significant SNPs and clinical features of hand OA were also explored. SNP rs11177 was found to be strongly associated with susceptibility of hand OA (P = 4.32 × 10(–5)). The minor allele of rs11177 was associated with increased susceptibility of hand OA. In addition, significant associations were also identified between genotypes of rs11177 and clinical features of hand OA patients including K-L grade (P < 0.01) and categorized pain scores (P < 0.01). Significant eQTL signals for rs11177 on GNL3 in multiple types of human tissues were also identified in GTEx database. Our results have established the link between GNL3 gene and susceptibility of hand OA. Nature Publishing Group UK 2022-09-27 /pmc/articles/PMC9515075/ /pubmed/36167888 http://dx.doi.org/10.1038/s41598-022-20287-4 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Wang, Xi
Xiao, Lin
Wang, Zhiyuan
Zhi, Liqiang
Li, Qiang
Common variants in GNL3 gene contributed the susceptibility of hand osteoarthritis in Han Chinese population
title Common variants in GNL3 gene contributed the susceptibility of hand osteoarthritis in Han Chinese population
title_full Common variants in GNL3 gene contributed the susceptibility of hand osteoarthritis in Han Chinese population
title_fullStr Common variants in GNL3 gene contributed the susceptibility of hand osteoarthritis in Han Chinese population
title_full_unstemmed Common variants in GNL3 gene contributed the susceptibility of hand osteoarthritis in Han Chinese population
title_short Common variants in GNL3 gene contributed the susceptibility of hand osteoarthritis in Han Chinese population
title_sort common variants in gnl3 gene contributed the susceptibility of hand osteoarthritis in han chinese population
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9515075/
https://www.ncbi.nlm.nih.gov/pubmed/36167888
http://dx.doi.org/10.1038/s41598-022-20287-4
work_keys_str_mv AT wangxi commonvariantsingnl3genecontributedthesusceptibilityofhandosteoarthritisinhanchinesepopulation
AT xiaolin commonvariantsingnl3genecontributedthesusceptibilityofhandosteoarthritisinhanchinesepopulation
AT wangzhiyuan commonvariantsingnl3genecontributedthesusceptibilityofhandosteoarthritisinhanchinesepopulation
AT zhiliqiang commonvariantsingnl3genecontributedthesusceptibilityofhandosteoarthritisinhanchinesepopulation
AT liqiang commonvariantsingnl3genecontributedthesusceptibilityofhandosteoarthritisinhanchinesepopulation