Complete chloroplast genome sequences of Acanthocalyx alba and Acanthocalyx nepalensis subsp. delavayi (Caprifoliaceae)

In this study, the chloroplast genomes of Acanthocalyx alba (Hand.-Mazz., 1925) and Acanthocalyx nepalensis subsp. delavayi (Franchet, 1885) were sequenced, and their total lengths were 148,720 bp and 149,253 bp, respectively. The A. alba genome contained two inverted repeat regions (IRs) of 21,849 ...

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Autores principales: Wang, Junjun, Zhao, Riza, Zhang, Zhifeng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Taylor & Francis 2022
Materias:
Plastome Announcement
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9518610/
https://www.ncbi.nlm.nih.gov/pubmed/36188667
http://dx.doi.org/10.1080/23802359.2022.2124824
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author Wang, Junjun
Zhao, Riza
Zhang, Zhifeng
author_facet Wang, Junjun
Zhao, Riza
Zhang, Zhifeng
author_sort Wang, Junjun
collection PubMed
description In this study, the chloroplast genomes of Acanthocalyx alba (Hand.-Mazz., 1925) and Acanthocalyx nepalensis subsp. delavayi (Franchet, 1885) were sequenced, and their total lengths were 148,720 bp and 149,253 bp, respectively. The A. alba genome contained two inverted repeat regions (IRs) of 21,849 bp, a large single-copy region (LSC) of 89,084 bp, and a small single-copy region (SSC) of 15,938 bp, whereas A. nepalensis subsp. delavayi contained two IRs of 21,736 bp, one LSC of 89,034 bp, and one SSC of 16,747 bp. The chloroplast genomes of both A. alba and A. nepalensis subsp. delavayi contained 109 genes, including 72 mRNA, 33 tRNA, and four rRNA genes. Phylogenetic analysis suggested that A. alba is in a clade with A. nepalensis subsp. delavayi. This study provides useful data for further phylogenetic studies of A. alba and A. nepalensis subsp. delavayi.
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spelling pubmed-95186102022-09-29 Complete chloroplast genome sequences of Acanthocalyx alba and Acanthocalyx nepalensis subsp. delavayi (Caprifoliaceae) Wang, Junjun Zhao, Riza Zhang, Zhifeng Mitochondrial DNA B Resour Plastome Announcement In this study, the chloroplast genomes of Acanthocalyx alba (Hand.-Mazz., 1925) and Acanthocalyx nepalensis subsp. delavayi (Franchet, 1885) were sequenced, and their total lengths were 148,720 bp and 149,253 bp, respectively. The A. alba genome contained two inverted repeat regions (IRs) of 21,849 bp, a large single-copy region (LSC) of 89,084 bp, and a small single-copy region (SSC) of 15,938 bp, whereas A. nepalensis subsp. delavayi contained two IRs of 21,736 bp, one LSC of 89,034 bp, and one SSC of 16,747 bp. The chloroplast genomes of both A. alba and A. nepalensis subsp. delavayi contained 109 genes, including 72 mRNA, 33 tRNA, and four rRNA genes. Phylogenetic analysis suggested that A. alba is in a clade with A. nepalensis subsp. delavayi. This study provides useful data for further phylogenetic studies of A. alba and A. nepalensis subsp. delavayi. Taylor & Francis 2022-09-23 /pmc/articles/PMC9518610/ /pubmed/36188667 http://dx.doi.org/10.1080/23802359.2022.2124824 Text en © 2022 The Author(s). Published by Informa UK Limited, trading as Taylor & Francis Group. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Plastome Announcement
Wang, Junjun
Zhao, Riza
Zhang, Zhifeng
Complete chloroplast genome sequences of Acanthocalyx alba and Acanthocalyx nepalensis subsp. delavayi (Caprifoliaceae)
title Complete chloroplast genome sequences of Acanthocalyx alba and Acanthocalyx nepalensis subsp. delavayi (Caprifoliaceae)
title_full Complete chloroplast genome sequences of Acanthocalyx alba and Acanthocalyx nepalensis subsp. delavayi (Caprifoliaceae)
title_fullStr Complete chloroplast genome sequences of Acanthocalyx alba and Acanthocalyx nepalensis subsp. delavayi (Caprifoliaceae)
title_full_unstemmed Complete chloroplast genome sequences of Acanthocalyx alba and Acanthocalyx nepalensis subsp. delavayi (Caprifoliaceae)
title_short Complete chloroplast genome sequences of Acanthocalyx alba and Acanthocalyx nepalensis subsp. delavayi (Caprifoliaceae)
title_sort complete chloroplast genome sequences of acanthocalyx alba and acanthocalyx nepalensis subsp. delavayi (caprifoliaceae)
topic Plastome Announcement
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9518610/
https://www.ncbi.nlm.nih.gov/pubmed/36188667
http://dx.doi.org/10.1080/23802359.2022.2124824
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