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CDCA4 as a novel molecular biomarker of poor prognosis in patients with lung adenocarcinoma

BACKGROUND: Because of the high incidence and poor prognoses of lung adenocarcinoma (LUAD), it is essential to identify cost-effective treatment options and accurate and reliable prognostic biomarkers. CDCA4 upregulation has been identified in many cancers. However, the prognostic importance of CDCA...

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Autores principales: Tan, Jianlong, Chen, Fengyu, Ouyang, Bin, Li, Xiuying, Zhang, Weidong, Gao, Xinglin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9520321/
https://www.ncbi.nlm.nih.gov/pubmed/36185189
http://dx.doi.org/10.3389/fonc.2022.865756
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author Tan, Jianlong
Chen, Fengyu
Ouyang, Bin
Li, Xiuying
Zhang, Weidong
Gao, Xinglin
author_facet Tan, Jianlong
Chen, Fengyu
Ouyang, Bin
Li, Xiuying
Zhang, Weidong
Gao, Xinglin
author_sort Tan, Jianlong
collection PubMed
description BACKGROUND: Because of the high incidence and poor prognoses of lung adenocarcinoma (LUAD), it is essential to identify cost-effective treatment options and accurate and reliable prognostic biomarkers. CDCA4 upregulation has been identified in many cancers. However, the prognostic importance of CDCA4 and its role in LUAD remain unknown. METHODS: CDCA4 expression was assessed through IHC, Western blotting (WB) and RT-PCR. The Cancer Genome Atlas (TCGA) provided data from 513 patients to study the expression and prognostic relevance of CDCA4 in LUAD. This study used gene set enrichment analyses (GSEA), gene ontology and KEGG pathway analyses for elucidating potential mechanisms underpinning the function of CDCA4 in LUAD. We also investigated correlations between immune infiltration and CDCA4 expression with single specimen GSEA (ssGSEA). RESULTS: According to database analysis and identification of patient tissue samples, CDCA4 expression in tumour tissues surpassed that in normal tissues (P< 0.001). Increased CDCA4 expression was positively correlated with a higher T, N, pathologic stage and poor primary therapy outcome. In addition, the Kaplan–Meier plotter exhibited that an elevated CDCA4 expression was related to worse disease-specific survival(DSS) and overall survival (OS) (DSS HR= 5.145, 95% CI=3.413-7.758, P<0.001; OS HR=3.570, 95% CI=2.472-5.155, P<0.001). Then multivariate COX regression analyses indicated that the CDCA4 gene was an independent risk consideration for prognoses. GO and KEGG results showed that CDCA4 and its neighbouring genes were enriched in the cell cycle and DNA replication. As determined by GSEA, CDCA4 was related to various immune-related signalling pathways (SPs), Homologous recombination, DNA replication and the cell cycle. SsGSEA analysis showed a significant association between CDCA4 expression and Th2 cells, mast cells, eosinophils and Th17 cells. CONCLUSIONS: CDCA4 expression is increased in LUAD and is a potential predictive biomarker and therapeutic target.
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spelling pubmed-95203212022-09-30 CDCA4 as a novel molecular biomarker of poor prognosis in patients with lung adenocarcinoma Tan, Jianlong Chen, Fengyu Ouyang, Bin Li, Xiuying Zhang, Weidong Gao, Xinglin Front Oncol Oncology BACKGROUND: Because of the high incidence and poor prognoses of lung adenocarcinoma (LUAD), it is essential to identify cost-effective treatment options and accurate and reliable prognostic biomarkers. CDCA4 upregulation has been identified in many cancers. However, the prognostic importance of CDCA4 and its role in LUAD remain unknown. METHODS: CDCA4 expression was assessed through IHC, Western blotting (WB) and RT-PCR. The Cancer Genome Atlas (TCGA) provided data from 513 patients to study the expression and prognostic relevance of CDCA4 in LUAD. This study used gene set enrichment analyses (GSEA), gene ontology and KEGG pathway analyses for elucidating potential mechanisms underpinning the function of CDCA4 in LUAD. We also investigated correlations between immune infiltration and CDCA4 expression with single specimen GSEA (ssGSEA). RESULTS: According to database analysis and identification of patient tissue samples, CDCA4 expression in tumour tissues surpassed that in normal tissues (P< 0.001). Increased CDCA4 expression was positively correlated with a higher T, N, pathologic stage and poor primary therapy outcome. In addition, the Kaplan–Meier plotter exhibited that an elevated CDCA4 expression was related to worse disease-specific survival(DSS) and overall survival (OS) (DSS HR= 5.145, 95% CI=3.413-7.758, P<0.001; OS HR=3.570, 95% CI=2.472-5.155, P<0.001). Then multivariate COX regression analyses indicated that the CDCA4 gene was an independent risk consideration for prognoses. GO and KEGG results showed that CDCA4 and its neighbouring genes were enriched in the cell cycle and DNA replication. As determined by GSEA, CDCA4 was related to various immune-related signalling pathways (SPs), Homologous recombination, DNA replication and the cell cycle. SsGSEA analysis showed a significant association between CDCA4 expression and Th2 cells, mast cells, eosinophils and Th17 cells. CONCLUSIONS: CDCA4 expression is increased in LUAD and is a potential predictive biomarker and therapeutic target. Frontiers Media S.A. 2022-09-15 /pmc/articles/PMC9520321/ /pubmed/36185189 http://dx.doi.org/10.3389/fonc.2022.865756 Text en Copyright © 2022 Tan, Chen, Ouyang, Li, Zhang and Gao https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Oncology
Tan, Jianlong
Chen, Fengyu
Ouyang, Bin
Li, Xiuying
Zhang, Weidong
Gao, Xinglin
CDCA4 as a novel molecular biomarker of poor prognosis in patients with lung adenocarcinoma
title CDCA4 as a novel molecular biomarker of poor prognosis in patients with lung adenocarcinoma
title_full CDCA4 as a novel molecular biomarker of poor prognosis in patients with lung adenocarcinoma
title_fullStr CDCA4 as a novel molecular biomarker of poor prognosis in patients with lung adenocarcinoma
title_full_unstemmed CDCA4 as a novel molecular biomarker of poor prognosis in patients with lung adenocarcinoma
title_short CDCA4 as a novel molecular biomarker of poor prognosis in patients with lung adenocarcinoma
title_sort cdca4 as a novel molecular biomarker of poor prognosis in patients with lung adenocarcinoma
topic Oncology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9520321/
https://www.ncbi.nlm.nih.gov/pubmed/36185189
http://dx.doi.org/10.3389/fonc.2022.865756
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