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A single-center analysis of genotype–phenotype characteristics of Chinese patients with autosomal dominant polycystic kidney disease by targeted exome sequencing

Background: Autosomal dominant polycystic kidney disease (ADPKD) is mainly caused by PKD1 and PKD2 mutations. However, only a few studies have investigated the genotype and phenotype characteristics of Asian patients with ADPKD. This study aimed to investigate the relationship between the natural co...

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Autores principales: Yan, Ziyan, Wang, Yuchen, Deng, Wenfeng, Zhou, Yi, Hu, Yangcheng, Qi, Ka, Liu, Ding, Xia, Renfei, Liu, Rumin, Zeng, Wenli, Zhang, Wei, Xu, Jian, Xiong, Fu, Miao, Yun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9520363/
https://www.ncbi.nlm.nih.gov/pubmed/36186434
http://dx.doi.org/10.3389/fgene.2022.934463
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author Yan, Ziyan
Wang, Yuchen
Deng, Wenfeng
Zhou, Yi
Hu, Yangcheng
Qi, Ka
Liu, Ding
Xia, Renfei
Liu, Rumin
Zeng, Wenli
Zhang, Wei
Xu, Jian
Xiong, Fu
Miao, Yun
author_facet Yan, Ziyan
Wang, Yuchen
Deng, Wenfeng
Zhou, Yi
Hu, Yangcheng
Qi, Ka
Liu, Ding
Xia, Renfei
Liu, Rumin
Zeng, Wenli
Zhang, Wei
Xu, Jian
Xiong, Fu
Miao, Yun
author_sort Yan, Ziyan
collection PubMed
description Background: Autosomal dominant polycystic kidney disease (ADPKD) is mainly caused by PKD1 and PKD2 mutations. However, only a few studies have investigated the genotype and phenotype characteristics of Asian patients with ADPKD. This study aimed to investigate the relationship between the natural course of ADPKD genotype and phenotype. Methods: Genetic studies of PKD1/2 genes of Chinese patients with ADPKD in a single center were performed using targeted exome sequencing and next-generation sequencing on peripheral blood DNA. Results: Among the 140 patients analyzed, 80.00% (n = 112) harbored PKD1 mutations, 11.43% (n = 16) harbored PKD2 mutations, and 8.57% (n = 12) harbored neither PKD1 nor PKD2 mutations. The average age at dialysis was 52.60 ± 11.36, 60.67 ± 5.64, and 52.11 ± 14.63 years, respectively. The renal survival rate of ADPKD patients with PKD1 mutations (77/112) was significantly lower than that of those with PKD2 mutations (9/16), leading to an earlier onset of end-stage renal disease (ESRD). Renal prognosis was poor for those with nonsense mutations, and they required earlier renal replacement therapy. Conclusions: The genotype and phenotype characteristics of ADPKD patients potentially vary across ethnic groups. Our findings supplement the genetic profiles of Chinese ADPKD patients, could serve as a guide for therapy monitoring and prognosis assessment of ADPKD, and may improve the clinical diagnosis.
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spelling pubmed-95203632022-09-30 A single-center analysis of genotype–phenotype characteristics of Chinese patients with autosomal dominant polycystic kidney disease by targeted exome sequencing Yan, Ziyan Wang, Yuchen Deng, Wenfeng Zhou, Yi Hu, Yangcheng Qi, Ka Liu, Ding Xia, Renfei Liu, Rumin Zeng, Wenli Zhang, Wei Xu, Jian Xiong, Fu Miao, Yun Front Genet Genetics Background: Autosomal dominant polycystic kidney disease (ADPKD) is mainly caused by PKD1 and PKD2 mutations. However, only a few studies have investigated the genotype and phenotype characteristics of Asian patients with ADPKD. This study aimed to investigate the relationship between the natural course of ADPKD genotype and phenotype. Methods: Genetic studies of PKD1/2 genes of Chinese patients with ADPKD in a single center were performed using targeted exome sequencing and next-generation sequencing on peripheral blood DNA. Results: Among the 140 patients analyzed, 80.00% (n = 112) harbored PKD1 mutations, 11.43% (n = 16) harbored PKD2 mutations, and 8.57% (n = 12) harbored neither PKD1 nor PKD2 mutations. The average age at dialysis was 52.60 ± 11.36, 60.67 ± 5.64, and 52.11 ± 14.63 years, respectively. The renal survival rate of ADPKD patients with PKD1 mutations (77/112) was significantly lower than that of those with PKD2 mutations (9/16), leading to an earlier onset of end-stage renal disease (ESRD). Renal prognosis was poor for those with nonsense mutations, and they required earlier renal replacement therapy. Conclusions: The genotype and phenotype characteristics of ADPKD patients potentially vary across ethnic groups. Our findings supplement the genetic profiles of Chinese ADPKD patients, could serve as a guide for therapy monitoring and prognosis assessment of ADPKD, and may improve the clinical diagnosis. Frontiers Media S.A. 2022-09-15 /pmc/articles/PMC9520363/ /pubmed/36186434 http://dx.doi.org/10.3389/fgene.2022.934463 Text en Copyright © 2022 Yan, Wang, Deng, Zhou, Hu, Qi, Liu, Xia, Liu, Zeng, Zhang, Xu, Xiong and Miao. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Genetics
Yan, Ziyan
Wang, Yuchen
Deng, Wenfeng
Zhou, Yi
Hu, Yangcheng
Qi, Ka
Liu, Ding
Xia, Renfei
Liu, Rumin
Zeng, Wenli
Zhang, Wei
Xu, Jian
Xiong, Fu
Miao, Yun
A single-center analysis of genotype–phenotype characteristics of Chinese patients with autosomal dominant polycystic kidney disease by targeted exome sequencing
title A single-center analysis of genotype–phenotype characteristics of Chinese patients with autosomal dominant polycystic kidney disease by targeted exome sequencing
title_full A single-center analysis of genotype–phenotype characteristics of Chinese patients with autosomal dominant polycystic kidney disease by targeted exome sequencing
title_fullStr A single-center analysis of genotype–phenotype characteristics of Chinese patients with autosomal dominant polycystic kidney disease by targeted exome sequencing
title_full_unstemmed A single-center analysis of genotype–phenotype characteristics of Chinese patients with autosomal dominant polycystic kidney disease by targeted exome sequencing
title_short A single-center analysis of genotype–phenotype characteristics of Chinese patients with autosomal dominant polycystic kidney disease by targeted exome sequencing
title_sort single-center analysis of genotype–phenotype characteristics of chinese patients with autosomal dominant polycystic kidney disease by targeted exome sequencing
topic Genetics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9520363/
https://www.ncbi.nlm.nih.gov/pubmed/36186434
http://dx.doi.org/10.3389/fgene.2022.934463
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