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Integrative analysis of chemical properties and functions of drugs for adverse drug reaction prediction based on multi-label deep neural network
The prediction of adverse drug reactions (ADR) is an important step of drug discovery and design process. Different drug properties have been employed for ADR prediction but the prediction capability of drug properties and drug functions in integrated manner is yet to be explored. In the present wor...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
De Gruyter
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9521819/ https://www.ncbi.nlm.nih.gov/pubmed/35585715 http://dx.doi.org/10.1515/jib-2022-0007 |
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author | Das, Pranab Yogita, Pal, Vipin |
author_facet | Das, Pranab Yogita, Pal, Vipin |
author_sort | Das, Pranab |
collection | PubMed |
description | The prediction of adverse drug reactions (ADR) is an important step of drug discovery and design process. Different drug properties have been employed for ADR prediction but the prediction capability of drug properties and drug functions in integrated manner is yet to be explored. In the present work, a multi-label deep neural network and MLSMOTE based methodology has been proposed for ADR prediction. The proposed methodology has been applied on SMILES Strings data of drugs, 17 molecular descriptors data of drugs and drug functions data individually and in integrated manner for ADR prediction. The experimental results shows that the SMILES Strings + drug functions has outperformed other types of data with regards to ADR prediction capability. |
format | Online Article Text |
id | pubmed-9521819 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | De Gruyter |
record_format | MEDLINE/PubMed |
spelling | pubmed-95218192022-10-26 Integrative analysis of chemical properties and functions of drugs for adverse drug reaction prediction based on multi-label deep neural network Das, Pranab Yogita, Pal, Vipin J Integr Bioinform Workshop The prediction of adverse drug reactions (ADR) is an important step of drug discovery and design process. Different drug properties have been employed for ADR prediction but the prediction capability of drug properties and drug functions in integrated manner is yet to be explored. In the present work, a multi-label deep neural network and MLSMOTE based methodology has been proposed for ADR prediction. The proposed methodology has been applied on SMILES Strings data of drugs, 17 molecular descriptors data of drugs and drug functions data individually and in integrated manner for ADR prediction. The experimental results shows that the SMILES Strings + drug functions has outperformed other types of data with regards to ADR prediction capability. De Gruyter 2022-05-19 /pmc/articles/PMC9521819/ /pubmed/35585715 http://dx.doi.org/10.1515/jib-2022-0007 Text en © 2022 the author(s), published by De Gruyter, Berlin/Boston https://creativecommons.org/licenses/by/4.0/This work is licensed under the Creative Commons Attribution 4.0 International License. |
spellingShingle | Workshop Das, Pranab Yogita, Pal, Vipin Integrative analysis of chemical properties and functions of drugs for adverse drug reaction prediction based on multi-label deep neural network |
title | Integrative analysis of chemical properties and functions of drugs for adverse drug reaction prediction based on multi-label deep neural network |
title_full | Integrative analysis of chemical properties and functions of drugs for adverse drug reaction prediction based on multi-label deep neural network |
title_fullStr | Integrative analysis of chemical properties and functions of drugs for adverse drug reaction prediction based on multi-label deep neural network |
title_full_unstemmed | Integrative analysis of chemical properties and functions of drugs for adverse drug reaction prediction based on multi-label deep neural network |
title_short | Integrative analysis of chemical properties and functions of drugs for adverse drug reaction prediction based on multi-label deep neural network |
title_sort | integrative analysis of chemical properties and functions of drugs for adverse drug reaction prediction based on multi-label deep neural network |
topic | Workshop |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9521819/ https://www.ncbi.nlm.nih.gov/pubmed/35585715 http://dx.doi.org/10.1515/jib-2022-0007 |
work_keys_str_mv | AT daspranab integrativeanalysisofchemicalpropertiesandfunctionsofdrugsforadversedrugreactionpredictionbasedonmultilabeldeepneuralnetwork AT yogita integrativeanalysisofchemicalpropertiesandfunctionsofdrugsforadversedrugreactionpredictionbasedonmultilabeldeepneuralnetwork AT palvipin integrativeanalysisofchemicalpropertiesandfunctionsofdrugsforadversedrugreactionpredictionbasedonmultilabeldeepneuralnetwork |