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Classification of Southeast Asian mints (Mentha spp.) based on simple sequence repeat markers
Mentha is a complex genus encompassing many species as a consequence of their interspecific hybridization and polyploidy. Southeast Asian mints have been poorly distinguished though they are widely used for culinary and medical purposes. In this study, we have analyzed Southeast Asian mints and know...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Japanese Society of Breeding
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9522532/ https://www.ncbi.nlm.nih.gov/pubmed/36275937 http://dx.doi.org/10.1270/jsbbs.21058 |
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author | Fukui, Yuri Saito, Moeko Nakamura, Natsuno Mizuno, Taichi Sato, Shuichi Tsukuda, Mayu Nakaoka, Saori Tsuboi, Keita Sasaki, Azusa Kuramochi, Kouji Boonyaritthongchai, Panida Kaewmanee, Nichapat Thirapanmethee, Krit Chomnawang, Mullika Traidej Bongcheewin, Bhanubong Nguyen, Thuy Linh Nguyen, Huong Lan Thi Le, Huong Thi Okamoto, Shigehisa Nakamura, Takako Nakamura, Yasushi Kubo, Nakao |
author_facet | Fukui, Yuri Saito, Moeko Nakamura, Natsuno Mizuno, Taichi Sato, Shuichi Tsukuda, Mayu Nakaoka, Saori Tsuboi, Keita Sasaki, Azusa Kuramochi, Kouji Boonyaritthongchai, Panida Kaewmanee, Nichapat Thirapanmethee, Krit Chomnawang, Mullika Traidej Bongcheewin, Bhanubong Nguyen, Thuy Linh Nguyen, Huong Lan Thi Le, Huong Thi Okamoto, Shigehisa Nakamura, Takako Nakamura, Yasushi Kubo, Nakao |
author_sort | Fukui, Yuri |
collection | PubMed |
description | Mentha is a complex genus encompassing many species as a consequence of their interspecific hybridization and polyploidy. Southeast Asian mints have been poorly distinguished though they are widely used for culinary and medical purposes. In this study, we have analyzed Southeast Asian mints and known varieties as well as a related Lamiaceae species (Nepeta sp.) using simple sequence repeat (SSR) markers and leaf morphology. Two types of mints were clearly distinguished based on their venation pattern and leaf shape index. We developed 12 SSR markers that allowed good amplification in the Mentha and another Lamiaceae species. In the SSR-based phylogram, the Mentha lines could be delimited into groups I–VI. The Southeast Asian mints divided into groups I and II, and the phylogram separated most of the available species, with groups I and II containing the known species M. × cordifolia and M. arvensis, respectively. The separation of the two groups was supported by a population structure analysis. The SSR markers developed in this study enabled the simultaneous classification of mints and will help improve our understanding of the genetic composition of known mint varieties and as yet unclassified Southeast Asian mints. |
format | Online Article Text |
id | pubmed-9522532 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Japanese Society of Breeding |
record_format | MEDLINE/PubMed |
spelling | pubmed-95225322022-10-20 Classification of Southeast Asian mints (Mentha spp.) based on simple sequence repeat markers Fukui, Yuri Saito, Moeko Nakamura, Natsuno Mizuno, Taichi Sato, Shuichi Tsukuda, Mayu Nakaoka, Saori Tsuboi, Keita Sasaki, Azusa Kuramochi, Kouji Boonyaritthongchai, Panida Kaewmanee, Nichapat Thirapanmethee, Krit Chomnawang, Mullika Traidej Bongcheewin, Bhanubong Nguyen, Thuy Linh Nguyen, Huong Lan Thi Le, Huong Thi Okamoto, Shigehisa Nakamura, Takako Nakamura, Yasushi Kubo, Nakao Breed Sci Note Mentha is a complex genus encompassing many species as a consequence of their interspecific hybridization and polyploidy. Southeast Asian mints have been poorly distinguished though they are widely used for culinary and medical purposes. In this study, we have analyzed Southeast Asian mints and known varieties as well as a related Lamiaceae species (Nepeta sp.) using simple sequence repeat (SSR) markers and leaf morphology. Two types of mints were clearly distinguished based on their venation pattern and leaf shape index. We developed 12 SSR markers that allowed good amplification in the Mentha and another Lamiaceae species. In the SSR-based phylogram, the Mentha lines could be delimited into groups I–VI. The Southeast Asian mints divided into groups I and II, and the phylogram separated most of the available species, with groups I and II containing the known species M. × cordifolia and M. arvensis, respectively. The separation of the two groups was supported by a population structure analysis. The SSR markers developed in this study enabled the simultaneous classification of mints and will help improve our understanding of the genetic composition of known mint varieties and as yet unclassified Southeast Asian mints. Japanese Society of Breeding 2022-04 2022-03-09 /pmc/articles/PMC9522532/ /pubmed/36275937 http://dx.doi.org/10.1270/jsbbs.21058 Text en Copyright © 2022 by JAPANESE SOCIETY OF BREEDING https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (BY) License (CC-BY 4.0: https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Note Fukui, Yuri Saito, Moeko Nakamura, Natsuno Mizuno, Taichi Sato, Shuichi Tsukuda, Mayu Nakaoka, Saori Tsuboi, Keita Sasaki, Azusa Kuramochi, Kouji Boonyaritthongchai, Panida Kaewmanee, Nichapat Thirapanmethee, Krit Chomnawang, Mullika Traidej Bongcheewin, Bhanubong Nguyen, Thuy Linh Nguyen, Huong Lan Thi Le, Huong Thi Okamoto, Shigehisa Nakamura, Takako Nakamura, Yasushi Kubo, Nakao Classification of Southeast Asian mints (Mentha spp.) based on simple sequence repeat markers |
title | Classification of Southeast Asian mints (Mentha spp.) based on simple sequence repeat markers |
title_full | Classification of Southeast Asian mints (Mentha spp.) based on simple sequence repeat markers |
title_fullStr | Classification of Southeast Asian mints (Mentha spp.) based on simple sequence repeat markers |
title_full_unstemmed | Classification of Southeast Asian mints (Mentha spp.) based on simple sequence repeat markers |
title_short | Classification of Southeast Asian mints (Mentha spp.) based on simple sequence repeat markers |
title_sort | classification of southeast asian mints (mentha spp.) based on simple sequence repeat markers |
topic | Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9522532/ https://www.ncbi.nlm.nih.gov/pubmed/36275937 http://dx.doi.org/10.1270/jsbbs.21058 |
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