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The clinicopathological significances and related signal pathways of BTG3 mRNA expression in cancers: A bioinformatics analysis
B cell transposition gene 3 (BTG3) is reported to be a tumor suppressor and suppresses proliferation and cell cycle progression. This study aims to analyze the clinicopathological and prognostic significances, and signal pathways of BTG3 mRNA expression in human beings through bioinformatics analysi...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9523479/ https://www.ncbi.nlm.nih.gov/pubmed/36186486 http://dx.doi.org/10.3389/fgene.2022.1006582 |
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author | Zheng, Hua-Chuan Xue, Hang Zhang, Cong-Yu Shi, Kai-Hang Zhang, Rui |
author_facet | Zheng, Hua-Chuan Xue, Hang Zhang, Cong-Yu Shi, Kai-Hang Zhang, Rui |
author_sort | Zheng, Hua-Chuan |
collection | PubMed |
description | B cell transposition gene 3 (BTG3) is reported to be a tumor suppressor and suppresses proliferation and cell cycle progression. This study aims to analyze the clinicopathological and prognostic significances, and signal pathways of BTG3 mRNA expression in human beings through bioinformatics analysis. We analyzed BTG3 expression using Oncomine, TCGA (the cancer genome atlas), Xiantao, UALCAN (The University of ALabama at Birmingham Cancer data analysis Portal) and Kaplan-Meier plotter databases. Down-regulated BTG3 expression was observed in lung and breast cancers, compared with normal tissues (p < 0.05), but not for gastric and ovarian cancer (p < 0.05). The methylation of BTG3 was shown to be adversely correlated with its mRNA expression (p < 0.05). BTG3 expression was higher in gastric intestinal-type than diffuse-type carcinomas, G(1) than G(3) carcinomas (p < 0.05), in female than male cancer patients, T(1-2) than T(3-4), and adenocarcinoma than squamous cell carcinoma of lung cancer (p < 0.05), in invasive ductal than lobular carcinoma, N(0) than N(1) and N(3), TNBC (triple-negative breast cancer) than luminal and Her2+, and Her2+ than luminal cancer of breast cancer (p < 0.05), and G(3) than G(2) ovarian carcinoma (p < 0.05). BTG3 expression was positively related to the survival rate of gastric and ovarian cancer patients (p < 0.05), but not for breast cancer (p < 0.05). KEGG and PPI (protein-protein interaction) analysis showed that the BTG3 was involved in cell cycle and DNA replication, digestion and absorption of fat and protein, spliceosome and ribosome in cancer. BTG3 expression was positively linked to carcinogenesis, histogenesis, and aggressive behaviors, and was employed to evaluate the prognosis of cancers by regulating cell cycle, metabolism, splicing and translation of RNA. |
format | Online Article Text |
id | pubmed-9523479 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-95234792022-10-01 The clinicopathological significances and related signal pathways of BTG3 mRNA expression in cancers: A bioinformatics analysis Zheng, Hua-Chuan Xue, Hang Zhang, Cong-Yu Shi, Kai-Hang Zhang, Rui Front Genet Genetics B cell transposition gene 3 (BTG3) is reported to be a tumor suppressor and suppresses proliferation and cell cycle progression. This study aims to analyze the clinicopathological and prognostic significances, and signal pathways of BTG3 mRNA expression in human beings through bioinformatics analysis. We analyzed BTG3 expression using Oncomine, TCGA (the cancer genome atlas), Xiantao, UALCAN (The University of ALabama at Birmingham Cancer data analysis Portal) and Kaplan-Meier plotter databases. Down-regulated BTG3 expression was observed in lung and breast cancers, compared with normal tissues (p < 0.05), but not for gastric and ovarian cancer (p < 0.05). The methylation of BTG3 was shown to be adversely correlated with its mRNA expression (p < 0.05). BTG3 expression was higher in gastric intestinal-type than diffuse-type carcinomas, G(1) than G(3) carcinomas (p < 0.05), in female than male cancer patients, T(1-2) than T(3-4), and adenocarcinoma than squamous cell carcinoma of lung cancer (p < 0.05), in invasive ductal than lobular carcinoma, N(0) than N(1) and N(3), TNBC (triple-negative breast cancer) than luminal and Her2+, and Her2+ than luminal cancer of breast cancer (p < 0.05), and G(3) than G(2) ovarian carcinoma (p < 0.05). BTG3 expression was positively related to the survival rate of gastric and ovarian cancer patients (p < 0.05), but not for breast cancer (p < 0.05). KEGG and PPI (protein-protein interaction) analysis showed that the BTG3 was involved in cell cycle and DNA replication, digestion and absorption of fat and protein, spliceosome and ribosome in cancer. BTG3 expression was positively linked to carcinogenesis, histogenesis, and aggressive behaviors, and was employed to evaluate the prognosis of cancers by regulating cell cycle, metabolism, splicing and translation of RNA. Frontiers Media S.A. 2022-09-16 /pmc/articles/PMC9523479/ /pubmed/36186486 http://dx.doi.org/10.3389/fgene.2022.1006582 Text en Copyright © 2022 Zheng, Xue, Zhang, Shi and Zhang. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Zheng, Hua-Chuan Xue, Hang Zhang, Cong-Yu Shi, Kai-Hang Zhang, Rui The clinicopathological significances and related signal pathways of BTG3 mRNA expression in cancers: A bioinformatics analysis |
title | The clinicopathological significances and related signal pathways of BTG3 mRNA expression in cancers: A bioinformatics analysis |
title_full | The clinicopathological significances and related signal pathways of BTG3 mRNA expression in cancers: A bioinformatics analysis |
title_fullStr | The clinicopathological significances and related signal pathways of BTG3 mRNA expression in cancers: A bioinformatics analysis |
title_full_unstemmed | The clinicopathological significances and related signal pathways of BTG3 mRNA expression in cancers: A bioinformatics analysis |
title_short | The clinicopathological significances and related signal pathways of BTG3 mRNA expression in cancers: A bioinformatics analysis |
title_sort | clinicopathological significances and related signal pathways of btg3 mrna expression in cancers: a bioinformatics analysis |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9523479/ https://www.ncbi.nlm.nih.gov/pubmed/36186486 http://dx.doi.org/10.3389/fgene.2022.1006582 |
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