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GAN-based semi-automated augmentation online tool for agricultural pest detection: A case study on whiteflies

Deep neural networks can be used to diagnose and detect plant diseases, helping to avoid the plant health-related crop production losses ranging from 20 to 50% annually. However, the data collection and annotation required to achieve high accuracies can be expensive and sometimes very difficult to o...

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Autores principales: Karam, Christophe, Awad, Mariette, Abou Jawdah, Yusuf, Ezzeddine, Nour, Fardoun, Aya
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9523729/
https://www.ncbi.nlm.nih.gov/pubmed/36186035
http://dx.doi.org/10.3389/fpls.2022.813050
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author Karam, Christophe
Awad, Mariette
Abou Jawdah, Yusuf
Ezzeddine, Nour
Fardoun, Aya
author_facet Karam, Christophe
Awad, Mariette
Abou Jawdah, Yusuf
Ezzeddine, Nour
Fardoun, Aya
author_sort Karam, Christophe
collection PubMed
description Deep neural networks can be used to diagnose and detect plant diseases, helping to avoid the plant health-related crop production losses ranging from 20 to 50% annually. However, the data collection and annotation required to achieve high accuracies can be expensive and sometimes very difficult to obtain in specific use-cases. To this end, this work proposes a synthetic data generation pipeline based on generative adversarial networks (GANs), allowing users to artificially generate images to augment their small datasets through its web interface. The image-generation pipeline is tested on a home-collected dataset of whitefly pests, Bemisia tabaci, on different crop types. The data augmentation is shown to improve the performance of lightweight object detection models when the dataset size is increased from 140 to 560 images, seeing a jump in recall at 0.50 IoU from 54.4 to 93.2%, and an increase in the average IoU from 34.6 to 70.9%, without the use of GANs. When GANs are used to increase the number of source object masks and further diversify the dataset, there is an additional 1.4 and 2.6% increase in recall and average IoU, respectively. The authenticity of the generated data is also validated by human reviewers, who reviewed the GANs generated data and scored an average of 56% in distinguishing fake from real insects for low-resolutions sets, and 67% for high-resolution sets.
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spelling pubmed-95237292022-10-01 GAN-based semi-automated augmentation online tool for agricultural pest detection: A case study on whiteflies Karam, Christophe Awad, Mariette Abou Jawdah, Yusuf Ezzeddine, Nour Fardoun, Aya Front Plant Sci Plant Science Deep neural networks can be used to diagnose and detect plant diseases, helping to avoid the plant health-related crop production losses ranging from 20 to 50% annually. However, the data collection and annotation required to achieve high accuracies can be expensive and sometimes very difficult to obtain in specific use-cases. To this end, this work proposes a synthetic data generation pipeline based on generative adversarial networks (GANs), allowing users to artificially generate images to augment their small datasets through its web interface. The image-generation pipeline is tested on a home-collected dataset of whitefly pests, Bemisia tabaci, on different crop types. The data augmentation is shown to improve the performance of lightweight object detection models when the dataset size is increased from 140 to 560 images, seeing a jump in recall at 0.50 IoU from 54.4 to 93.2%, and an increase in the average IoU from 34.6 to 70.9%, without the use of GANs. When GANs are used to increase the number of source object masks and further diversify the dataset, there is an additional 1.4 and 2.6% increase in recall and average IoU, respectively. The authenticity of the generated data is also validated by human reviewers, who reviewed the GANs generated data and scored an average of 56% in distinguishing fake from real insects for low-resolutions sets, and 67% for high-resolution sets. Frontiers Media S.A. 2022-09-16 /pmc/articles/PMC9523729/ /pubmed/36186035 http://dx.doi.org/10.3389/fpls.2022.813050 Text en Copyright © 2022 Karam, Awad, Abou Jawdah, Ezzeddine and Fardoun. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Karam, Christophe
Awad, Mariette
Abou Jawdah, Yusuf
Ezzeddine, Nour
Fardoun, Aya
GAN-based semi-automated augmentation online tool for agricultural pest detection: A case study on whiteflies
title GAN-based semi-automated augmentation online tool for agricultural pest detection: A case study on whiteflies
title_full GAN-based semi-automated augmentation online tool for agricultural pest detection: A case study on whiteflies
title_fullStr GAN-based semi-automated augmentation online tool for agricultural pest detection: A case study on whiteflies
title_full_unstemmed GAN-based semi-automated augmentation online tool for agricultural pest detection: A case study on whiteflies
title_short GAN-based semi-automated augmentation online tool for agricultural pest detection: A case study on whiteflies
title_sort gan-based semi-automated augmentation online tool for agricultural pest detection: a case study on whiteflies
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9523729/
https://www.ncbi.nlm.nih.gov/pubmed/36186035
http://dx.doi.org/10.3389/fpls.2022.813050
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