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A ubiquitous amino acid source for prokaryotic and eukaryotic cell-free transcription-translation systems

Cell-free gene expression (CFE) systems are an attractive tool for engineering within synthetic biology and for industrial production of high-value recombinant proteins. CFE reactions require a cell extract, energy system, amino acids, and DNA, to catalyse mRNA transcription and protein synthesis. T...

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Autores principales: Nagappa, Lakshmeesha K., Sato, Wakana, Alam, Farzana, Chengan, Kameshwari, Smales, Christopher M., Von Der Haar, Tobias, Polizzi, Karen M., Adamala, Katarzyna P., Moore, Simon J.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9524191/
https://www.ncbi.nlm.nih.gov/pubmed/36185432
http://dx.doi.org/10.3389/fbioe.2022.992708
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author Nagappa, Lakshmeesha K.
Sato, Wakana
Alam, Farzana
Chengan, Kameshwari
Smales, Christopher M.
Von Der Haar, Tobias
Polizzi, Karen M.
Adamala, Katarzyna P.
Moore, Simon J.
author_facet Nagappa, Lakshmeesha K.
Sato, Wakana
Alam, Farzana
Chengan, Kameshwari
Smales, Christopher M.
Von Der Haar, Tobias
Polizzi, Karen M.
Adamala, Katarzyna P.
Moore, Simon J.
author_sort Nagappa, Lakshmeesha K.
collection PubMed
description Cell-free gene expression (CFE) systems are an attractive tool for engineering within synthetic biology and for industrial production of high-value recombinant proteins. CFE reactions require a cell extract, energy system, amino acids, and DNA, to catalyse mRNA transcription and protein synthesis. To provide an amino acid source, CFE systems typically use a commercial standard, which is often proprietary. Herein we show that a range of common microbiology rich media (i.e., tryptone, peptone, yeast extract and casamino acids) unexpectedly provide an effective and low-cost amino acid source. We show that this approach is generalisable, by comparing batch variability and protein production in the following range of CFE systems: Escherichia coli (Rosetta(™) 2 (DE3), BL21(DE3)), Streptomyces venezuelae and Pichia pastoris. In all CFE systems, we show equivalent or increased protein synthesis capacity upon replacement of the commercial amino acid source. In conclusion, we suggest rich microbiology media provides a new amino acid source for CFE systems with potential broad use in synthetic biology and industrial biotechnology applications.
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spelling pubmed-95241912022-10-01 A ubiquitous amino acid source for prokaryotic and eukaryotic cell-free transcription-translation systems Nagappa, Lakshmeesha K. Sato, Wakana Alam, Farzana Chengan, Kameshwari Smales, Christopher M. Von Der Haar, Tobias Polizzi, Karen M. Adamala, Katarzyna P. Moore, Simon J. Front Bioeng Biotechnol Bioengineering and Biotechnology Cell-free gene expression (CFE) systems are an attractive tool for engineering within synthetic biology and for industrial production of high-value recombinant proteins. CFE reactions require a cell extract, energy system, amino acids, and DNA, to catalyse mRNA transcription and protein synthesis. To provide an amino acid source, CFE systems typically use a commercial standard, which is often proprietary. Herein we show that a range of common microbiology rich media (i.e., tryptone, peptone, yeast extract and casamino acids) unexpectedly provide an effective and low-cost amino acid source. We show that this approach is generalisable, by comparing batch variability and protein production in the following range of CFE systems: Escherichia coli (Rosetta(™) 2 (DE3), BL21(DE3)), Streptomyces venezuelae and Pichia pastoris. In all CFE systems, we show equivalent or increased protein synthesis capacity upon replacement of the commercial amino acid source. In conclusion, we suggest rich microbiology media provides a new amino acid source for CFE systems with potential broad use in synthetic biology and industrial biotechnology applications. Frontiers Media S.A. 2022-09-16 /pmc/articles/PMC9524191/ /pubmed/36185432 http://dx.doi.org/10.3389/fbioe.2022.992708 Text en Copyright © 2022 Nagappa, Sato, Alam, Chengan, Smales, Von Der Haar, Polizzi, Adamala and Moore. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Bioengineering and Biotechnology
Nagappa, Lakshmeesha K.
Sato, Wakana
Alam, Farzana
Chengan, Kameshwari
Smales, Christopher M.
Von Der Haar, Tobias
Polizzi, Karen M.
Adamala, Katarzyna P.
Moore, Simon J.
A ubiquitous amino acid source for prokaryotic and eukaryotic cell-free transcription-translation systems
title A ubiquitous amino acid source for prokaryotic and eukaryotic cell-free transcription-translation systems
title_full A ubiquitous amino acid source for prokaryotic and eukaryotic cell-free transcription-translation systems
title_fullStr A ubiquitous amino acid source for prokaryotic and eukaryotic cell-free transcription-translation systems
title_full_unstemmed A ubiquitous amino acid source for prokaryotic and eukaryotic cell-free transcription-translation systems
title_short A ubiquitous amino acid source for prokaryotic and eukaryotic cell-free transcription-translation systems
title_sort ubiquitous amino acid source for prokaryotic and eukaryotic cell-free transcription-translation systems
topic Bioengineering and Biotechnology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9524191/
https://www.ncbi.nlm.nih.gov/pubmed/36185432
http://dx.doi.org/10.3389/fbioe.2022.992708
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