Cargando…
Digital Extended Specimens: Enabling an Extensible Network of Biodiversity Data Records as Integrated Digital Objects on the Internet
The early twenty-first century has witnessed massive expansions in availability and accessibility of digital data in virtually all domains of the biodiversity sciences. Led by an array of asynchronous digitization activities spanning ecological, environmental, climatological, and biological collecti...
Autores principales: | , , , , , , , , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9525127/ https://www.ncbi.nlm.nih.gov/pubmed/36196222 http://dx.doi.org/10.1093/biosci/biac060 |
_version_ | 1784800641929969664 |
---|---|
author | Hardisty, Alex R Ellwood, Elizabeth R Nelson, Gil Zimkus, Breda Buschbom, Jutta Addink, Wouter Rabeler, Richard K Bates, John Bentley, Andrew Fortes, José A B Hansen, Sara Macklin, James A Mast, Austin R Miller, Joseph T Monfils, Anna K Paul, Deborah L Wallis, Elycia Webster, Michael |
author_facet | Hardisty, Alex R Ellwood, Elizabeth R Nelson, Gil Zimkus, Breda Buschbom, Jutta Addink, Wouter Rabeler, Richard K Bates, John Bentley, Andrew Fortes, José A B Hansen, Sara Macklin, James A Mast, Austin R Miller, Joseph T Monfils, Anna K Paul, Deborah L Wallis, Elycia Webster, Michael |
author_sort | Hardisty, Alex R |
collection | PubMed |
description | The early twenty-first century has witnessed massive expansions in availability and accessibility of digital data in virtually all domains of the biodiversity sciences. Led by an array of asynchronous digitization activities spanning ecological, environmental, climatological, and biological collections data, these initiatives have resulted in a plethora of mostly disconnected and siloed data, leaving to researchers the tedious and time-consuming manual task of finding and connecting them in usable ways, integrating them into coherent data sets, and making them interoperable. The focus to date has been on elevating analog and physical records to digital replicas in local databases prior to elevating them to ever-growing aggregations of essentially disconnected discipline-specific information. In the present article, we propose a new interconnected network of digital objects on the Internet—the Digital Extended Specimen (DES) network—that transcends existing aggregator technology, augments the DES with third-party data through machine algorithms, and provides a platform for more efficient research and robust interdisciplinary discovery. |
format | Online Article Text |
id | pubmed-9525127 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-95251272022-10-03 Digital Extended Specimens: Enabling an Extensible Network of Biodiversity Data Records as Integrated Digital Objects on the Internet Hardisty, Alex R Ellwood, Elizabeth R Nelson, Gil Zimkus, Breda Buschbom, Jutta Addink, Wouter Rabeler, Richard K Bates, John Bentley, Andrew Fortes, José A B Hansen, Sara Macklin, James A Mast, Austin R Miller, Joseph T Monfils, Anna K Paul, Deborah L Wallis, Elycia Webster, Michael Bioscience Overview Articles The early twenty-first century has witnessed massive expansions in availability and accessibility of digital data in virtually all domains of the biodiversity sciences. Led by an array of asynchronous digitization activities spanning ecological, environmental, climatological, and biological collections data, these initiatives have resulted in a plethora of mostly disconnected and siloed data, leaving to researchers the tedious and time-consuming manual task of finding and connecting them in usable ways, integrating them into coherent data sets, and making them interoperable. The focus to date has been on elevating analog and physical records to digital replicas in local databases prior to elevating them to ever-growing aggregations of essentially disconnected discipline-specific information. In the present article, we propose a new interconnected network of digital objects on the Internet—the Digital Extended Specimen (DES) network—that transcends existing aggregator technology, augments the DES with third-party data through machine algorithms, and provides a platform for more efficient research and robust interdisciplinary discovery. Oxford University Press 2022-08-03 /pmc/articles/PMC9525127/ /pubmed/36196222 http://dx.doi.org/10.1093/biosci/biac060 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of the American Institute of Biological Sciences. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Overview Articles Hardisty, Alex R Ellwood, Elizabeth R Nelson, Gil Zimkus, Breda Buschbom, Jutta Addink, Wouter Rabeler, Richard K Bates, John Bentley, Andrew Fortes, José A B Hansen, Sara Macklin, James A Mast, Austin R Miller, Joseph T Monfils, Anna K Paul, Deborah L Wallis, Elycia Webster, Michael Digital Extended Specimens: Enabling an Extensible Network of Biodiversity Data Records as Integrated Digital Objects on the Internet |
title | Digital Extended Specimens: Enabling an Extensible Network of Biodiversity Data Records as Integrated Digital Objects on the Internet |
title_full | Digital Extended Specimens: Enabling an Extensible Network of Biodiversity Data Records as Integrated Digital Objects on the Internet |
title_fullStr | Digital Extended Specimens: Enabling an Extensible Network of Biodiversity Data Records as Integrated Digital Objects on the Internet |
title_full_unstemmed | Digital Extended Specimens: Enabling an Extensible Network of Biodiversity Data Records as Integrated Digital Objects on the Internet |
title_short | Digital Extended Specimens: Enabling an Extensible Network of Biodiversity Data Records as Integrated Digital Objects on the Internet |
title_sort | digital extended specimens: enabling an extensible network of biodiversity data records as integrated digital objects on the internet |
topic | Overview Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9525127/ https://www.ncbi.nlm.nih.gov/pubmed/36196222 http://dx.doi.org/10.1093/biosci/biac060 |
work_keys_str_mv | AT hardistyalexr digitalextendedspecimensenablinganextensiblenetworkofbiodiversitydatarecordsasintegrateddigitalobjectsontheinternet AT ellwoodelizabethr digitalextendedspecimensenablinganextensiblenetworkofbiodiversitydatarecordsasintegrateddigitalobjectsontheinternet AT nelsongil digitalextendedspecimensenablinganextensiblenetworkofbiodiversitydatarecordsasintegrateddigitalobjectsontheinternet AT zimkusbreda digitalextendedspecimensenablinganextensiblenetworkofbiodiversitydatarecordsasintegrateddigitalobjectsontheinternet AT buschbomjutta digitalextendedspecimensenablinganextensiblenetworkofbiodiversitydatarecordsasintegrateddigitalobjectsontheinternet AT addinkwouter digitalextendedspecimensenablinganextensiblenetworkofbiodiversitydatarecordsasintegrateddigitalobjectsontheinternet AT rabelerrichardk digitalextendedspecimensenablinganextensiblenetworkofbiodiversitydatarecordsasintegrateddigitalobjectsontheinternet AT batesjohn digitalextendedspecimensenablinganextensiblenetworkofbiodiversitydatarecordsasintegrateddigitalobjectsontheinternet AT bentleyandrew digitalextendedspecimensenablinganextensiblenetworkofbiodiversitydatarecordsasintegrateddigitalobjectsontheinternet AT fortesjoseab digitalextendedspecimensenablinganextensiblenetworkofbiodiversitydatarecordsasintegrateddigitalobjectsontheinternet AT hansensara digitalextendedspecimensenablinganextensiblenetworkofbiodiversitydatarecordsasintegrateddigitalobjectsontheinternet AT macklinjamesa digitalextendedspecimensenablinganextensiblenetworkofbiodiversitydatarecordsasintegrateddigitalobjectsontheinternet AT mastaustinr digitalextendedspecimensenablinganextensiblenetworkofbiodiversitydatarecordsasintegrateddigitalobjectsontheinternet AT millerjosepht digitalextendedspecimensenablinganextensiblenetworkofbiodiversitydatarecordsasintegrateddigitalobjectsontheinternet AT monfilsannak digitalextendedspecimensenablinganextensiblenetworkofbiodiversitydatarecordsasintegrateddigitalobjectsontheinternet AT pauldeborahl digitalextendedspecimensenablinganextensiblenetworkofbiodiversitydatarecordsasintegrateddigitalobjectsontheinternet AT walliselycia digitalextendedspecimensenablinganextensiblenetworkofbiodiversitydatarecordsasintegrateddigitalobjectsontheinternet AT webstermichael digitalextendedspecimensenablinganextensiblenetworkofbiodiversitydatarecordsasintegrateddigitalobjectsontheinternet |