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Etiology of Macular Edema Defined by Deep Learning in Optical Coherence Tomography Scans
PURPOSE: To develop an automated method based on deep learning (DL) to classify macular edema (ME) from the evaluation of optical coherence tomography (OCT) scans. METHODS: A total of 4230 images were obtained from data repositories of patients attended in an ophthalmology clinic in Colombia and two...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
The Association for Research in Vision and Ophthalmology
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9526369/ https://www.ncbi.nlm.nih.gov/pubmed/36169966 http://dx.doi.org/10.1167/tvst.11.9.29 |
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author | Padilla-Pantoja, Fabio Daniel Sanchez, Yeison D. Quijano-Nieto, Bernardo Alfonso Perdomo, Oscar J. Gonzalez, Fabio A. |
author_facet | Padilla-Pantoja, Fabio Daniel Sanchez, Yeison D. Quijano-Nieto, Bernardo Alfonso Perdomo, Oscar J. Gonzalez, Fabio A. |
author_sort | Padilla-Pantoja, Fabio Daniel |
collection | PubMed |
description | PURPOSE: To develop an automated method based on deep learning (DL) to classify macular edema (ME) from the evaluation of optical coherence tomography (OCT) scans. METHODS: A total of 4230 images were obtained from data repositories of patients attended in an ophthalmology clinic in Colombia and two free open-access databases. They were annotated with four biomarkers (BMs) as intraretinal fluid, subretinal fluid, hyperreflective foci/tissue, and drusen. Then the scans were labeled as control or ocular disease among diabetic macular edema (DME), neovascular age-related macular degeneration (nAMD), and retinal vein occlusion (RVO) by two expert ophthalmologists. Our method was developed by following four consecutive phases: segmentation of BMs, the combination of BMs, feature extraction with convolutional neural networks to achieve binary classification for each disease, and, finally, multiclass classification of diseases and control images. RESULTS: The accuracy of our model for nAMD was 97%, and for DME, RVO, and control were 94%, 93%, and 93%, respectively. Area under curve values were 0.99, 0.98, 0.96, and 0.97, respectively. The mean Cohen's kappa coefficient for the multiclass classification task was 0.84. CONCLUSIONS: The proposed DL model may identify OCT scans as normal and ME. In addition, it may classify its cause among three major exudative retinal diseases with high accuracy and reliability. TRANSLATIONAL RELEVANCE: Our DL approach can optimize the efficiency and timeliness of appropriate etiological diagnosis of ME, thus improving patient access and clinical decision making. It could be useful in places with a shortage of specialists and for readers that evaluate OCT scans remotely. |
format | Online Article Text |
id | pubmed-9526369 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | The Association for Research in Vision and Ophthalmology |
record_format | MEDLINE/PubMed |
spelling | pubmed-95263692022-10-02 Etiology of Macular Edema Defined by Deep Learning in Optical Coherence Tomography Scans Padilla-Pantoja, Fabio Daniel Sanchez, Yeison D. Quijano-Nieto, Bernardo Alfonso Perdomo, Oscar J. Gonzalez, Fabio A. Transl Vis Sci Technol Artificial Intelligence PURPOSE: To develop an automated method based on deep learning (DL) to classify macular edema (ME) from the evaluation of optical coherence tomography (OCT) scans. METHODS: A total of 4230 images were obtained from data repositories of patients attended in an ophthalmology clinic in Colombia and two free open-access databases. They were annotated with four biomarkers (BMs) as intraretinal fluid, subretinal fluid, hyperreflective foci/tissue, and drusen. Then the scans were labeled as control or ocular disease among diabetic macular edema (DME), neovascular age-related macular degeneration (nAMD), and retinal vein occlusion (RVO) by two expert ophthalmologists. Our method was developed by following four consecutive phases: segmentation of BMs, the combination of BMs, feature extraction with convolutional neural networks to achieve binary classification for each disease, and, finally, multiclass classification of diseases and control images. RESULTS: The accuracy of our model for nAMD was 97%, and for DME, RVO, and control were 94%, 93%, and 93%, respectively. Area under curve values were 0.99, 0.98, 0.96, and 0.97, respectively. The mean Cohen's kappa coefficient for the multiclass classification task was 0.84. CONCLUSIONS: The proposed DL model may identify OCT scans as normal and ME. In addition, it may classify its cause among three major exudative retinal diseases with high accuracy and reliability. TRANSLATIONAL RELEVANCE: Our DL approach can optimize the efficiency and timeliness of appropriate etiological diagnosis of ME, thus improving patient access and clinical decision making. It could be useful in places with a shortage of specialists and for readers that evaluate OCT scans remotely. The Association for Research in Vision and Ophthalmology 2022-09-28 /pmc/articles/PMC9526369/ /pubmed/36169966 http://dx.doi.org/10.1167/tvst.11.9.29 Text en Copyright 2022 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International License. |
spellingShingle | Artificial Intelligence Padilla-Pantoja, Fabio Daniel Sanchez, Yeison D. Quijano-Nieto, Bernardo Alfonso Perdomo, Oscar J. Gonzalez, Fabio A. Etiology of Macular Edema Defined by Deep Learning in Optical Coherence Tomography Scans |
title | Etiology of Macular Edema Defined by Deep Learning in Optical Coherence Tomography Scans |
title_full | Etiology of Macular Edema Defined by Deep Learning in Optical Coherence Tomography Scans |
title_fullStr | Etiology of Macular Edema Defined by Deep Learning in Optical Coherence Tomography Scans |
title_full_unstemmed | Etiology of Macular Edema Defined by Deep Learning in Optical Coherence Tomography Scans |
title_short | Etiology of Macular Edema Defined by Deep Learning in Optical Coherence Tomography Scans |
title_sort | etiology of macular edema defined by deep learning in optical coherence tomography scans |
topic | Artificial Intelligence |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9526369/ https://www.ncbi.nlm.nih.gov/pubmed/36169966 http://dx.doi.org/10.1167/tvst.11.9.29 |
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