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Survival Prediction of Children Undergoing Hematopoietic Stem Cell Transplantation Using Different Machine Learning Classifiers by Performing Chi-Square Test and Hyperparameter Optimization: A Retrospective Analysis

Bone marrow transplant (BMT) is an effective surgical treatment for bone marrow-related disorders. However, several associated risk factors can impair long-term survival after BMT. Machine learning (ML) technologies have been proven useful in survival prediction of BMT receivers along with the influ...

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Autores principales: Ratul, Ishrak Jahan, Wani, Ummay Habiba, Nishat, Mirza Muntasir, Al-Monsur, Abdullah, Ar-Rafi, Abrar Mohammad, Faisal, Fahim, Kabir, Mohammad Ridwan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9527434/
https://www.ncbi.nlm.nih.gov/pubmed/36199778
http://dx.doi.org/10.1155/2022/9391136
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author Ratul, Ishrak Jahan
Wani, Ummay Habiba
Nishat, Mirza Muntasir
Al-Monsur, Abdullah
Ar-Rafi, Abrar Mohammad
Faisal, Fahim
Kabir, Mohammad Ridwan
author_facet Ratul, Ishrak Jahan
Wani, Ummay Habiba
Nishat, Mirza Muntasir
Al-Monsur, Abdullah
Ar-Rafi, Abrar Mohammad
Faisal, Fahim
Kabir, Mohammad Ridwan
author_sort Ratul, Ishrak Jahan
collection PubMed
description Bone marrow transplant (BMT) is an effective surgical treatment for bone marrow-related disorders. However, several associated risk factors can impair long-term survival after BMT. Machine learning (ML) technologies have been proven useful in survival prediction of BMT receivers along with the influences that limit their resilience. In this study, an efficient classification model predicting the survival of children undergoing BMT is presented using a public dataset. Several supervised ML methods were investigated in this regard with an 80-20 train-test split ratio. To ensure prediction with minimal time and resources, only the top 11 out of the 59 dataset features were considered using Chi-square feature selection method. Furthermore, hyperparameter optimization (HPO) using the grid search cross-validation (GSCV) technique was adopted to increase the accuracy of prediction. Four experiments were conducted utilizing a combination of default and optimized hyperparameters on the original and reduced datasets. Our investigation revealed that the top 11 features of HPO had the same prediction accuracy (94.73%) as the entire dataset with default parameters, however, requiring minimal time and resources. Hence, the proposed approach may aid in the development of a computer-aided diagnostic system with satisfactory accuracy and minimal computation time by utilizing medical data records.
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spelling pubmed-95274342022-10-04 Survival Prediction of Children Undergoing Hematopoietic Stem Cell Transplantation Using Different Machine Learning Classifiers by Performing Chi-Square Test and Hyperparameter Optimization: A Retrospective Analysis Ratul, Ishrak Jahan Wani, Ummay Habiba Nishat, Mirza Muntasir Al-Monsur, Abdullah Ar-Rafi, Abrar Mohammad Faisal, Fahim Kabir, Mohammad Ridwan Comput Math Methods Med Research Article Bone marrow transplant (BMT) is an effective surgical treatment for bone marrow-related disorders. However, several associated risk factors can impair long-term survival after BMT. Machine learning (ML) technologies have been proven useful in survival prediction of BMT receivers along with the influences that limit their resilience. In this study, an efficient classification model predicting the survival of children undergoing BMT is presented using a public dataset. Several supervised ML methods were investigated in this regard with an 80-20 train-test split ratio. To ensure prediction with minimal time and resources, only the top 11 out of the 59 dataset features were considered using Chi-square feature selection method. Furthermore, hyperparameter optimization (HPO) using the grid search cross-validation (GSCV) technique was adopted to increase the accuracy of prediction. Four experiments were conducted utilizing a combination of default and optimized hyperparameters on the original and reduced datasets. Our investigation revealed that the top 11 features of HPO had the same prediction accuracy (94.73%) as the entire dataset with default parameters, however, requiring minimal time and resources. Hence, the proposed approach may aid in the development of a computer-aided diagnostic system with satisfactory accuracy and minimal computation time by utilizing medical data records. Hindawi 2022-09-25 /pmc/articles/PMC9527434/ /pubmed/36199778 http://dx.doi.org/10.1155/2022/9391136 Text en Copyright © 2022 Ishrak Jahan Ratul et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Ratul, Ishrak Jahan
Wani, Ummay Habiba
Nishat, Mirza Muntasir
Al-Monsur, Abdullah
Ar-Rafi, Abrar Mohammad
Faisal, Fahim
Kabir, Mohammad Ridwan
Survival Prediction of Children Undergoing Hematopoietic Stem Cell Transplantation Using Different Machine Learning Classifiers by Performing Chi-Square Test and Hyperparameter Optimization: A Retrospective Analysis
title Survival Prediction of Children Undergoing Hematopoietic Stem Cell Transplantation Using Different Machine Learning Classifiers by Performing Chi-Square Test and Hyperparameter Optimization: A Retrospective Analysis
title_full Survival Prediction of Children Undergoing Hematopoietic Stem Cell Transplantation Using Different Machine Learning Classifiers by Performing Chi-Square Test and Hyperparameter Optimization: A Retrospective Analysis
title_fullStr Survival Prediction of Children Undergoing Hematopoietic Stem Cell Transplantation Using Different Machine Learning Classifiers by Performing Chi-Square Test and Hyperparameter Optimization: A Retrospective Analysis
title_full_unstemmed Survival Prediction of Children Undergoing Hematopoietic Stem Cell Transplantation Using Different Machine Learning Classifiers by Performing Chi-Square Test and Hyperparameter Optimization: A Retrospective Analysis
title_short Survival Prediction of Children Undergoing Hematopoietic Stem Cell Transplantation Using Different Machine Learning Classifiers by Performing Chi-Square Test and Hyperparameter Optimization: A Retrospective Analysis
title_sort survival prediction of children undergoing hematopoietic stem cell transplantation using different machine learning classifiers by performing chi-square test and hyperparameter optimization: a retrospective analysis
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9527434/
https://www.ncbi.nlm.nih.gov/pubmed/36199778
http://dx.doi.org/10.1155/2022/9391136
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