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Functional analysis of the N‐terminal region of acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis

Acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis (TTE0866) has an N‐terminal region (NTR; residues 23–135) between the signal sequence (residues 1–22) and the catalytic domain (residues 136–324), which is of unknown function. Our previous study revealed the crystal struct...

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Autores principales: Sasamoto, Kohei, Himiyama, Tomoki, Moriyoshi, Kunihiko, Ohmoto, Takashi, Uegaki, Koichi, Nakamura, Tsutomu, Nishiya, Yoshiaki
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9527590/
https://www.ncbi.nlm.nih.gov/pubmed/36054591
http://dx.doi.org/10.1002/2211-5463.13476
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author Sasamoto, Kohei
Himiyama, Tomoki
Moriyoshi, Kunihiko
Ohmoto, Takashi
Uegaki, Koichi
Nakamura, Tsutomu
Nishiya, Yoshiaki
author_facet Sasamoto, Kohei
Himiyama, Tomoki
Moriyoshi, Kunihiko
Ohmoto, Takashi
Uegaki, Koichi
Nakamura, Tsutomu
Nishiya, Yoshiaki
author_sort Sasamoto, Kohei
collection PubMed
description Acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis (TTE0866) has an N‐terminal region (NTR; residues 23–135) between the signal sequence (residues 1–22) and the catalytic domain (residues 136–324), which is of unknown function. Our previous study revealed the crystal structure of the wild‐type (WT) enzyme containing the NTR and the catalytic domain. Although the structure of the catalytic domain was successfully determined, that of the NTR was undetermined, as its electron density was unclear. In this study, we investigated the role of the NTR through functional and structural analyses of NTR truncation mutants. Based on sequence and secondary structure analyses, NTR was confirmed to be an intrinsically disordered region. The truncation of NTR significantly decreased the solubility of the proteins at low salt concentrations compared with that of the WT. The NTR‐truncated mutant easily crystallized in a conventional buffer solution. The crystal exhibited crystallographic properties comparable with those of the WT crystals suitable for structural determination. These results suggest that NTR plays a role in maintaining the solubility and inhibiting the crystallization of the catalytic domain.
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spelling pubmed-95275902022-10-06 Functional analysis of the N‐terminal region of acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis Sasamoto, Kohei Himiyama, Tomoki Moriyoshi, Kunihiko Ohmoto, Takashi Uegaki, Koichi Nakamura, Tsutomu Nishiya, Yoshiaki FEBS Open Bio Research Articles Acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis (TTE0866) has an N‐terminal region (NTR; residues 23–135) between the signal sequence (residues 1–22) and the catalytic domain (residues 136–324), which is of unknown function. Our previous study revealed the crystal structure of the wild‐type (WT) enzyme containing the NTR and the catalytic domain. Although the structure of the catalytic domain was successfully determined, that of the NTR was undetermined, as its electron density was unclear. In this study, we investigated the role of the NTR through functional and structural analyses of NTR truncation mutants. Based on sequence and secondary structure analyses, NTR was confirmed to be an intrinsically disordered region. The truncation of NTR significantly decreased the solubility of the proteins at low salt concentrations compared with that of the WT. The NTR‐truncated mutant easily crystallized in a conventional buffer solution. The crystal exhibited crystallographic properties comparable with those of the WT crystals suitable for structural determination. These results suggest that NTR plays a role in maintaining the solubility and inhibiting the crystallization of the catalytic domain. John Wiley and Sons Inc. 2022-09-20 /pmc/articles/PMC9527590/ /pubmed/36054591 http://dx.doi.org/10.1002/2211-5463.13476 Text en © 2022 The Authors. FEBS Open Bio published by John Wiley & Sons Ltd on behalf of Federation of European Biochemical Societies. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Sasamoto, Kohei
Himiyama, Tomoki
Moriyoshi, Kunihiko
Ohmoto, Takashi
Uegaki, Koichi
Nakamura, Tsutomu
Nishiya, Yoshiaki
Functional analysis of the N‐terminal region of acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis
title Functional analysis of the N‐terminal region of acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis
title_full Functional analysis of the N‐terminal region of acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis
title_fullStr Functional analysis of the N‐terminal region of acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis
title_full_unstemmed Functional analysis of the N‐terminal region of acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis
title_short Functional analysis of the N‐terminal region of acetylxylan esterase from Caldanaerobacter subterraneus subsp. tengcongensis
title_sort functional analysis of the n‐terminal region of acetylxylan esterase from caldanaerobacter subterraneus subsp. tengcongensis
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9527590/
https://www.ncbi.nlm.nih.gov/pubmed/36054591
http://dx.doi.org/10.1002/2211-5463.13476
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