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Trajectory Surface Hopping for a Polarizable Embedding QM/MM Formulation

[Image: see text] We present the implementation of trajectory surface-hopping nonadiabatic dynamics for a polarizable embedding QM/MM formulation. Time-dependent density functional theory was used at the quantum mechanical level of theory, whereas the molecular mechanics description involved the pol...

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Autores principales: Bondanza, Mattia, Demoulin, Baptiste, Lipparini, Filippo, Barbatti, Mario, Mennucci, Benedetta
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2022
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9527758/
https://www.ncbi.nlm.nih.gov/pubmed/36107729
http://dx.doi.org/10.1021/acs.jpca.2c04756
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author Bondanza, Mattia
Demoulin, Baptiste
Lipparini, Filippo
Barbatti, Mario
Mennucci, Benedetta
author_facet Bondanza, Mattia
Demoulin, Baptiste
Lipparini, Filippo
Barbatti, Mario
Mennucci, Benedetta
author_sort Bondanza, Mattia
collection PubMed
description [Image: see text] We present the implementation of trajectory surface-hopping nonadiabatic dynamics for a polarizable embedding QM/MM formulation. Time-dependent density functional theory was used at the quantum mechanical level of theory, whereas the molecular mechanics description involved the polarizable AMOEBA force field. This implementation has been obtained by integrating the surface-hopping program Newton-X NS with an interface between the Gaussian 16 and the Tinker suites of codes to calculate QM/AMOEBA energies and forces. The implementation has been tested on a photoinduced electron-driven proton-transfer reaction involving pyrimidine and a hydrogen-bonded water surrounded by a small cluster of water molecules and within a large water droplet.
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spelling pubmed-95277582022-10-04 Trajectory Surface Hopping for a Polarizable Embedding QM/MM Formulation Bondanza, Mattia Demoulin, Baptiste Lipparini, Filippo Barbatti, Mario Mennucci, Benedetta J Phys Chem A [Image: see text] We present the implementation of trajectory surface-hopping nonadiabatic dynamics for a polarizable embedding QM/MM formulation. Time-dependent density functional theory was used at the quantum mechanical level of theory, whereas the molecular mechanics description involved the polarizable AMOEBA force field. This implementation has been obtained by integrating the surface-hopping program Newton-X NS with an interface between the Gaussian 16 and the Tinker suites of codes to calculate QM/AMOEBA energies and forces. The implementation has been tested on a photoinduced electron-driven proton-transfer reaction involving pyrimidine and a hydrogen-bonded water surrounded by a small cluster of water molecules and within a large water droplet. American Chemical Society 2022-09-15 2022-09-29 /pmc/articles/PMC9527758/ /pubmed/36107729 http://dx.doi.org/10.1021/acs.jpca.2c04756 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Bondanza, Mattia
Demoulin, Baptiste
Lipparini, Filippo
Barbatti, Mario
Mennucci, Benedetta
Trajectory Surface Hopping for a Polarizable Embedding QM/MM Formulation
title Trajectory Surface Hopping for a Polarizable Embedding QM/MM Formulation
title_full Trajectory Surface Hopping for a Polarizable Embedding QM/MM Formulation
title_fullStr Trajectory Surface Hopping for a Polarizable Embedding QM/MM Formulation
title_full_unstemmed Trajectory Surface Hopping for a Polarizable Embedding QM/MM Formulation
title_short Trajectory Surface Hopping for a Polarizable Embedding QM/MM Formulation
title_sort trajectory surface hopping for a polarizable embedding qm/mm formulation
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9527758/
https://www.ncbi.nlm.nih.gov/pubmed/36107729
http://dx.doi.org/10.1021/acs.jpca.2c04756
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