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MembraneDyn: simulating the dynamics of supported membrane stacks on the nanosecond timescale
The static structure factor and the undulation dynamics of a solid-supported membrane stack have previously been calculated by Romanov and Ul’yanov [Romanov & Ul’yanov (2002). Phys. Rev. E, 66, 061701]. Based on this prior work, the calculation has been extended to cover the membrane dynamics, i...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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International Union of Crystallography
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9527762/ https://www.ncbi.nlm.nih.gov/pubmed/36189744 http://dx.doi.org/10.1107/S2059798322008701 |
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author | Hayward, Dominic W. Jaksch, Sebastian Fomina, Margarita Dubey, Purushottam S. Frielinghaus, Henrich Holderer, Olaf Monkenbusch, Michael |
author_facet | Hayward, Dominic W. Jaksch, Sebastian Fomina, Margarita Dubey, Purushottam S. Frielinghaus, Henrich Holderer, Olaf Monkenbusch, Michael |
author_sort | Hayward, Dominic W. |
collection | PubMed |
description | The static structure factor and the undulation dynamics of a solid-supported membrane stack have previously been calculated by Romanov and Ul’yanov [Romanov & Ul’yanov (2002). Phys. Rev. E, 66, 061701]. Based on this prior work, the calculation has been extended to cover the membrane dynamics, i.e. the intermediate scattering function as a Fourier transform of the van Hove correlation function of the membrane stack. Fortran code which calculates the intermediate scattering function for a membrane stack on a solid support is presented. It allows the static and dynamic scattering functions to be calculated according to the derivation of Romanov and Ul’yanov. The physical properties of supported phospholipid bilayers can be examined in this way and the results can be directly compared with results obtained from grazing-incidence neutron spin-echo spectroscopy experiments. |
format | Online Article Text |
id | pubmed-9527762 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-95277622022-10-05 MembraneDyn: simulating the dynamics of supported membrane stacks on the nanosecond timescale Hayward, Dominic W. Jaksch, Sebastian Fomina, Margarita Dubey, Purushottam S. Frielinghaus, Henrich Holderer, Olaf Monkenbusch, Michael Acta Crystallogr D Struct Biol Research Papers The static structure factor and the undulation dynamics of a solid-supported membrane stack have previously been calculated by Romanov and Ul’yanov [Romanov & Ul’yanov (2002). Phys. Rev. E, 66, 061701]. Based on this prior work, the calculation has been extended to cover the membrane dynamics, i.e. the intermediate scattering function as a Fourier transform of the van Hove correlation function of the membrane stack. Fortran code which calculates the intermediate scattering function for a membrane stack on a solid support is presented. It allows the static and dynamic scattering functions to be calculated according to the derivation of Romanov and Ul’yanov. The physical properties of supported phospholipid bilayers can be examined in this way and the results can be directly compared with results obtained from grazing-incidence neutron spin-echo spectroscopy experiments. International Union of Crystallography 2022-09-27 /pmc/articles/PMC9527762/ /pubmed/36189744 http://dx.doi.org/10.1107/S2059798322008701 Text en © Dominic W. Hayward et al. 2022 https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited. |
spellingShingle | Research Papers Hayward, Dominic W. Jaksch, Sebastian Fomina, Margarita Dubey, Purushottam S. Frielinghaus, Henrich Holderer, Olaf Monkenbusch, Michael MembraneDyn: simulating the dynamics of supported membrane stacks on the nanosecond timescale |
title |
MembraneDyn: simulating the dynamics of supported membrane stacks on the nanosecond timescale |
title_full |
MembraneDyn: simulating the dynamics of supported membrane stacks on the nanosecond timescale |
title_fullStr |
MembraneDyn: simulating the dynamics of supported membrane stacks on the nanosecond timescale |
title_full_unstemmed |
MembraneDyn: simulating the dynamics of supported membrane stacks on the nanosecond timescale |
title_short |
MembraneDyn: simulating the dynamics of supported membrane stacks on the nanosecond timescale |
title_sort | membranedyn: simulating the dynamics of supported membrane stacks on the nanosecond timescale |
topic | Research Papers |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9527762/ https://www.ncbi.nlm.nih.gov/pubmed/36189744 http://dx.doi.org/10.1107/S2059798322008701 |
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