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Cryo-electron structures of the extreme thermostable enzymes Sulfur Oxygenase Reductase and Lumazine Synthase

Thermostable enzymes have the potential for use in a wide variety of biotechnological applications. Cryo-electron microscopy (cryo-EM) enables the imaging of biomolecules in their native aqueous environment. Here, we present high resolution cryo-EM structures of two thermostable enzymes that exhibit...

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Autores principales: Sobhy, Mohamed A., Zhao, Lingyun, Anjum, Dalaver, Behzad, Ali, Takahashi, Masateru, Tehseen, Muhammad, Biasio, Alfredo De, Sougrat, Rachid, Hamdan, Samir
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9529111/
https://www.ncbi.nlm.nih.gov/pubmed/36191023
http://dx.doi.org/10.1371/journal.pone.0275487
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author Sobhy, Mohamed A.
Zhao, Lingyun
Anjum, Dalaver
Behzad, Ali
Takahashi, Masateru
Tehseen, Muhammad
Biasio, Alfredo De
Sougrat, Rachid
Hamdan, Samir
author_facet Sobhy, Mohamed A.
Zhao, Lingyun
Anjum, Dalaver
Behzad, Ali
Takahashi, Masateru
Tehseen, Muhammad
Biasio, Alfredo De
Sougrat, Rachid
Hamdan, Samir
author_sort Sobhy, Mohamed A.
collection PubMed
description Thermostable enzymes have the potential for use in a wide variety of biotechnological applications. Cryo-electron microscopy (cryo-EM) enables the imaging of biomolecules in their native aqueous environment. Here, we present high resolution cryo-EM structures of two thermostable enzymes that exhibit multimeric cage-like structures arranged into two different point-group symmetries. First, we determined the structure of the Sulfur Oxygenase Reductase (SOR) enzyme that catalyzes both the oxygenation and disproportionation of elemental sulfur in Archea and is composed of 24 homomeric units each of MW ≃ 35 kDa arranged in octahedral symmetry. The structure of SOR from Acidianus ambivalens (7X9W) was determined at 2.78 Å resolution. The active site of each subunit inside the central nanocompartment is composed of Fe(3+) coordinated to two water molecules and the three amino acids (H86, H90 and E114). Second, we determined the structure of Lumazine Synthase (LS) from Aquifex aeolicus (7X7M) at 2.33 Å resolution. LS forms a cage-like structure consisting of 60 identical subunits each of MW ≃ 15 kDa arranged in a strict icosahedral symmetry. The LS subunits are interconnected by ion-pair network. Due to their thermostability and relatively easy purification scheme, both SOR and LS can serve as a model for the catalytic and structural characterization of biocatalysts as well as a benchmark for cryo-EM sample preparation, optimization of the acquisition parameters and 3D reconstruction.
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spelling pubmed-95291112022-10-04 Cryo-electron structures of the extreme thermostable enzymes Sulfur Oxygenase Reductase and Lumazine Synthase Sobhy, Mohamed A. Zhao, Lingyun Anjum, Dalaver Behzad, Ali Takahashi, Masateru Tehseen, Muhammad Biasio, Alfredo De Sougrat, Rachid Hamdan, Samir PLoS One Research Article Thermostable enzymes have the potential for use in a wide variety of biotechnological applications. Cryo-electron microscopy (cryo-EM) enables the imaging of biomolecules in their native aqueous environment. Here, we present high resolution cryo-EM structures of two thermostable enzymes that exhibit multimeric cage-like structures arranged into two different point-group symmetries. First, we determined the structure of the Sulfur Oxygenase Reductase (SOR) enzyme that catalyzes both the oxygenation and disproportionation of elemental sulfur in Archea and is composed of 24 homomeric units each of MW ≃ 35 kDa arranged in octahedral symmetry. The structure of SOR from Acidianus ambivalens (7X9W) was determined at 2.78 Å resolution. The active site of each subunit inside the central nanocompartment is composed of Fe(3+) coordinated to two water molecules and the three amino acids (H86, H90 and E114). Second, we determined the structure of Lumazine Synthase (LS) from Aquifex aeolicus (7X7M) at 2.33 Å resolution. LS forms a cage-like structure consisting of 60 identical subunits each of MW ≃ 15 kDa arranged in a strict icosahedral symmetry. The LS subunits are interconnected by ion-pair network. Due to their thermostability and relatively easy purification scheme, both SOR and LS can serve as a model for the catalytic and structural characterization of biocatalysts as well as a benchmark for cryo-EM sample preparation, optimization of the acquisition parameters and 3D reconstruction. Public Library of Science 2022-10-03 /pmc/articles/PMC9529111/ /pubmed/36191023 http://dx.doi.org/10.1371/journal.pone.0275487 Text en © 2022 Sobhy et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Sobhy, Mohamed A.
Zhao, Lingyun
Anjum, Dalaver
Behzad, Ali
Takahashi, Masateru
Tehseen, Muhammad
Biasio, Alfredo De
Sougrat, Rachid
Hamdan, Samir
Cryo-electron structures of the extreme thermostable enzymes Sulfur Oxygenase Reductase and Lumazine Synthase
title Cryo-electron structures of the extreme thermostable enzymes Sulfur Oxygenase Reductase and Lumazine Synthase
title_full Cryo-electron structures of the extreme thermostable enzymes Sulfur Oxygenase Reductase and Lumazine Synthase
title_fullStr Cryo-electron structures of the extreme thermostable enzymes Sulfur Oxygenase Reductase and Lumazine Synthase
title_full_unstemmed Cryo-electron structures of the extreme thermostable enzymes Sulfur Oxygenase Reductase and Lumazine Synthase
title_short Cryo-electron structures of the extreme thermostable enzymes Sulfur Oxygenase Reductase and Lumazine Synthase
title_sort cryo-electron structures of the extreme thermostable enzymes sulfur oxygenase reductase and lumazine synthase
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9529111/
https://www.ncbi.nlm.nih.gov/pubmed/36191023
http://dx.doi.org/10.1371/journal.pone.0275487
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