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Constructing and Validating a Pyroptosis-Related Genes Prognostic Signature for Stomach Adenocarcinoma and Immune Infiltration: Potential Biomarkers for Predicting the Overall Survival

BACKGROUND: Stomach adenocarcinoma (STAD) is a kind of cancer that begins in the stomach cells and has a poor overall survival rate. Following resection surgery, chemotherapy has been suggested as a curative method for stomach cancer. However, it is ineffective. Pyroptosis, a kind of inflammatory pr...

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Autores principales: Xu, Jingmin, Chen, Ke, Wei, Zhou, Wu, Zixuan, Huang, Xuyan, Cai, Minjie, Yuan, Kai, Huang, Peidong, Zhang, Jing, Wang, Shuai
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9529402/
https://www.ncbi.nlm.nih.gov/pubmed/36199800
http://dx.doi.org/10.1155/2022/3102743
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author Xu, Jingmin
Chen, Ke
Wei, Zhou
Wu, Zixuan
Huang, Xuyan
Cai, Minjie
Yuan, Kai
Huang, Peidong
Zhang, Jing
Wang, Shuai
author_facet Xu, Jingmin
Chen, Ke
Wei, Zhou
Wu, Zixuan
Huang, Xuyan
Cai, Minjie
Yuan, Kai
Huang, Peidong
Zhang, Jing
Wang, Shuai
author_sort Xu, Jingmin
collection PubMed
description BACKGROUND: Stomach adenocarcinoma (STAD) is a kind of cancer that begins in the stomach cells and has a poor overall survival rate. Following resection surgery, chemotherapy has been suggested as a curative method for stomach cancer. However, it is ineffective. Pyroptosis, a kind of inflammatory programmed cell death, has been shown to play a significant role in the development and progression of STAD. However, whether pyroptosis-related genes (PRGs) can be utilized to predict the diagnosis and prognosis of gastric cancer remains unknown. METHOD: The research measured at predictive PRGs in STAD samples from TCGA and GEO. Lasso regression was used to build the prediction model. Coexpression analysis revealed that gene expression was linked to pyroptosis. PRGs were found to be overexpressed in high-risk individuals, implying that they could be used in a model to predict STAD prognosis. RESULT: Immunological and tumor-related pathways were discovered using GSEA. In STAD patients, the genes GPX3, PDGFRL, RGS2, and SERPINE1 may be connected to the cancer process. The levels of expression also differed between the two risk groups. CONCLUSION: The purpose of this study is to identify and verify STAD-associated PRGs that can effectively guide prognosis and the immunological milieu in STAD patients as well as offer evidence for the development of pyroptosis-related molecularly targeted therapeutics. Therefore, PRGs and the link between immunological and PRGs in STAD may be therapeutic targets.
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spelling pubmed-95294022022-10-04 Constructing and Validating a Pyroptosis-Related Genes Prognostic Signature for Stomach Adenocarcinoma and Immune Infiltration: Potential Biomarkers for Predicting the Overall Survival Xu, Jingmin Chen, Ke Wei, Zhou Wu, Zixuan Huang, Xuyan Cai, Minjie Yuan, Kai Huang, Peidong Zhang, Jing Wang, Shuai J Oncol Research Article BACKGROUND: Stomach adenocarcinoma (STAD) is a kind of cancer that begins in the stomach cells and has a poor overall survival rate. Following resection surgery, chemotherapy has been suggested as a curative method for stomach cancer. However, it is ineffective. Pyroptosis, a kind of inflammatory programmed cell death, has been shown to play a significant role in the development and progression of STAD. However, whether pyroptosis-related genes (PRGs) can be utilized to predict the diagnosis and prognosis of gastric cancer remains unknown. METHOD: The research measured at predictive PRGs in STAD samples from TCGA and GEO. Lasso regression was used to build the prediction model. Coexpression analysis revealed that gene expression was linked to pyroptosis. PRGs were found to be overexpressed in high-risk individuals, implying that they could be used in a model to predict STAD prognosis. RESULT: Immunological and tumor-related pathways were discovered using GSEA. In STAD patients, the genes GPX3, PDGFRL, RGS2, and SERPINE1 may be connected to the cancer process. The levels of expression also differed between the two risk groups. CONCLUSION: The purpose of this study is to identify and verify STAD-associated PRGs that can effectively guide prognosis and the immunological milieu in STAD patients as well as offer evidence for the development of pyroptosis-related molecularly targeted therapeutics. Therefore, PRGs and the link between immunological and PRGs in STAD may be therapeutic targets. Hindawi 2022-09-26 /pmc/articles/PMC9529402/ /pubmed/36199800 http://dx.doi.org/10.1155/2022/3102743 Text en Copyright © 2022 Jingmin Xu et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Xu, Jingmin
Chen, Ke
Wei, Zhou
Wu, Zixuan
Huang, Xuyan
Cai, Minjie
Yuan, Kai
Huang, Peidong
Zhang, Jing
Wang, Shuai
Constructing and Validating a Pyroptosis-Related Genes Prognostic Signature for Stomach Adenocarcinoma and Immune Infiltration: Potential Biomarkers for Predicting the Overall Survival
title Constructing and Validating a Pyroptosis-Related Genes Prognostic Signature for Stomach Adenocarcinoma and Immune Infiltration: Potential Biomarkers for Predicting the Overall Survival
title_full Constructing and Validating a Pyroptosis-Related Genes Prognostic Signature for Stomach Adenocarcinoma and Immune Infiltration: Potential Biomarkers for Predicting the Overall Survival
title_fullStr Constructing and Validating a Pyroptosis-Related Genes Prognostic Signature for Stomach Adenocarcinoma and Immune Infiltration: Potential Biomarkers for Predicting the Overall Survival
title_full_unstemmed Constructing and Validating a Pyroptosis-Related Genes Prognostic Signature for Stomach Adenocarcinoma and Immune Infiltration: Potential Biomarkers for Predicting the Overall Survival
title_short Constructing and Validating a Pyroptosis-Related Genes Prognostic Signature for Stomach Adenocarcinoma and Immune Infiltration: Potential Biomarkers for Predicting the Overall Survival
title_sort constructing and validating a pyroptosis-related genes prognostic signature for stomach adenocarcinoma and immune infiltration: potential biomarkers for predicting the overall survival
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9529402/
https://www.ncbi.nlm.nih.gov/pubmed/36199800
http://dx.doi.org/10.1155/2022/3102743
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