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Rvb1/Rvb2 proteins couple transcription and translation during glucose starvation

During times of unpredictable stress, organisms must adapt their gene expression to maximize survival. Along with changes in transcription, one conserved means of gene regulation during conditions that quickly repress translation is the formation of cytoplasmic phase-separated mRNP granules such as...

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Autores principales: Chen, Yang S, Hou, Wanfu, Tracy, Sharon, Harvey, Alex T, Harjono, Vince, Xu, Fan, Moresco, James J, Yates, John R, Zid, Brian M
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9531950/
https://www.ncbi.nlm.nih.gov/pubmed/36107469
http://dx.doi.org/10.7554/eLife.76965
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author Chen, Yang S
Hou, Wanfu
Tracy, Sharon
Harvey, Alex T
Harjono, Vince
Xu, Fan
Moresco, James J
Yates, John R
Zid, Brian M
author_facet Chen, Yang S
Hou, Wanfu
Tracy, Sharon
Harvey, Alex T
Harjono, Vince
Xu, Fan
Moresco, James J
Yates, John R
Zid, Brian M
author_sort Chen, Yang S
collection PubMed
description During times of unpredictable stress, organisms must adapt their gene expression to maximize survival. Along with changes in transcription, one conserved means of gene regulation during conditions that quickly repress translation is the formation of cytoplasmic phase-separated mRNP granules such as P-bodies and stress granules. Previously, we identified that distinct steps in gene expression can be coupled during glucose starvation as promoter sequences in the nucleus are able to direct the subcellular localization and translatability of mRNAs in the cytosol. Here, we report that Rvb1 and Rvb2, conserved ATPase proteins implicated as protein assembly chaperones and chromatin remodelers, were enriched at the promoters and mRNAs of genes involved in alternative glucose metabolism pathways that we previously found to be transcriptionally upregulated but translationally downregulated during glucose starvation in yeast. Engineered Rvb1/Rvb2-binding on mRNAs was sufficient to sequester mRNAs into mRNP granules and repress their translation. Additionally, this Rvb tethering to the mRNA drove further transcriptional upregulation of the target genes. Further, we found that depletion of Rvb2 caused decreased alternative glucose metabolism gene mRNA induction, but upregulation of protein synthesis during glucose starvation. Overall, our results point to Rvb1/Rvb2 coupling transcription, mRNA granular localization, and translatability of mRNAs during glucose starvation. This Rvb-mediated rapid gene regulation could potentially serve as an efficient recovery plan for cells after stress removal.
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spelling pubmed-95319502022-10-05 Rvb1/Rvb2 proteins couple transcription and translation during glucose starvation Chen, Yang S Hou, Wanfu Tracy, Sharon Harvey, Alex T Harjono, Vince Xu, Fan Moresco, James J Yates, John R Zid, Brian M eLife Cell Biology During times of unpredictable stress, organisms must adapt their gene expression to maximize survival. Along with changes in transcription, one conserved means of gene regulation during conditions that quickly repress translation is the formation of cytoplasmic phase-separated mRNP granules such as P-bodies and stress granules. Previously, we identified that distinct steps in gene expression can be coupled during glucose starvation as promoter sequences in the nucleus are able to direct the subcellular localization and translatability of mRNAs in the cytosol. Here, we report that Rvb1 and Rvb2, conserved ATPase proteins implicated as protein assembly chaperones and chromatin remodelers, were enriched at the promoters and mRNAs of genes involved in alternative glucose metabolism pathways that we previously found to be transcriptionally upregulated but translationally downregulated during glucose starvation in yeast. Engineered Rvb1/Rvb2-binding on mRNAs was sufficient to sequester mRNAs into mRNP granules and repress their translation. Additionally, this Rvb tethering to the mRNA drove further transcriptional upregulation of the target genes. Further, we found that depletion of Rvb2 caused decreased alternative glucose metabolism gene mRNA induction, but upregulation of protein synthesis during glucose starvation. Overall, our results point to Rvb1/Rvb2 coupling transcription, mRNA granular localization, and translatability of mRNAs during glucose starvation. This Rvb-mediated rapid gene regulation could potentially serve as an efficient recovery plan for cells after stress removal. eLife Sciences Publications, Ltd 2022-09-15 /pmc/articles/PMC9531950/ /pubmed/36107469 http://dx.doi.org/10.7554/eLife.76965 Text en © 2022, Chen et al https://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Cell Biology
Chen, Yang S
Hou, Wanfu
Tracy, Sharon
Harvey, Alex T
Harjono, Vince
Xu, Fan
Moresco, James J
Yates, John R
Zid, Brian M
Rvb1/Rvb2 proteins couple transcription and translation during glucose starvation
title Rvb1/Rvb2 proteins couple transcription and translation during glucose starvation
title_full Rvb1/Rvb2 proteins couple transcription and translation during glucose starvation
title_fullStr Rvb1/Rvb2 proteins couple transcription and translation during glucose starvation
title_full_unstemmed Rvb1/Rvb2 proteins couple transcription and translation during glucose starvation
title_short Rvb1/Rvb2 proteins couple transcription and translation during glucose starvation
title_sort rvb1/rvb2 proteins couple transcription and translation during glucose starvation
topic Cell Biology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9531950/
https://www.ncbi.nlm.nih.gov/pubmed/36107469
http://dx.doi.org/10.7554/eLife.76965
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