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Surfactancy in a tadpole model of proteins

We model the environment of eukaryotic nuclei by representing macromolecules by only their entropic properties, with globular molecules represented by spherical colloids and flexible molecules by polymers. We put particular focus on proteins with both globular and intrinsically disordered regions, w...

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Detalles Bibliográficos
Autores principales: Dyer, O. T., Ball, R. C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9532023/
https://www.ncbi.nlm.nih.gov/pubmed/36195115
http://dx.doi.org/10.1098/rsif.2022.0172
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author Dyer, O. T.
Ball, R. C.
author_facet Dyer, O. T.
Ball, R. C.
author_sort Dyer, O. T.
collection PubMed
description We model the environment of eukaryotic nuclei by representing macromolecules by only their entropic properties, with globular molecules represented by spherical colloids and flexible molecules by polymers. We put particular focus on proteins with both globular and intrinsically disordered regions, which we represent with ‘tadpole’ constructed by grafting single polymers and colloids together. In Monte Carlo simulations, we find these tadpoles support phase separation via depletion flocculation, and demonstrate several surfactant behaviours, including being found preferentially at interfaces and forming micelles in single phase solution. Furthermore, the model parameters can be tuned to give a tadpole a preference for either bulk phase. However, we find entropy too weak to drive these behaviours by itself at likely biological concentrations.
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spelling pubmed-95320232022-10-14 Surfactancy in a tadpole model of proteins Dyer, O. T. Ball, R. C. J R Soc Interface Life Sciences–Physics interface We model the environment of eukaryotic nuclei by representing macromolecules by only their entropic properties, with globular molecules represented by spherical colloids and flexible molecules by polymers. We put particular focus on proteins with both globular and intrinsically disordered regions, which we represent with ‘tadpole’ constructed by grafting single polymers and colloids together. In Monte Carlo simulations, we find these tadpoles support phase separation via depletion flocculation, and demonstrate several surfactant behaviours, including being found preferentially at interfaces and forming micelles in single phase solution. Furthermore, the model parameters can be tuned to give a tadpole a preference for either bulk phase. However, we find entropy too weak to drive these behaviours by itself at likely biological concentrations. The Royal Society 2022-10-05 /pmc/articles/PMC9532023/ /pubmed/36195115 http://dx.doi.org/10.1098/rsif.2022.0172 Text en © 2022 The Authors. https://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, provided the original author and source are credited.
spellingShingle Life Sciences–Physics interface
Dyer, O. T.
Ball, R. C.
Surfactancy in a tadpole model of proteins
title Surfactancy in a tadpole model of proteins
title_full Surfactancy in a tadpole model of proteins
title_fullStr Surfactancy in a tadpole model of proteins
title_full_unstemmed Surfactancy in a tadpole model of proteins
title_short Surfactancy in a tadpole model of proteins
title_sort surfactancy in a tadpole model of proteins
topic Life Sciences–Physics interface
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9532023/
https://www.ncbi.nlm.nih.gov/pubmed/36195115
http://dx.doi.org/10.1098/rsif.2022.0172
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