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Scale-attentional U-Net for the segmentation of the median nerve in ultrasound images
PURPOSE: The aim of this study was to develop a neural network that accurately and effectively segments the median nerve in ultrasound (US) images. METHODS: In total, 1,305 images of the median nerve of 123 normal subjects were used to train and evaluate the model. Four datasets from two measurement...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Korean Society of Ultrasound in Medicine
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9532202/ https://www.ncbi.nlm.nih.gov/pubmed/35754116 http://dx.doi.org/10.14366/usg.21214 |
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author | Kim, Beom Suk Yu, Minhyeong Kim, Sunwoo Yoon, Joon Shik Baek, Seungjun |
author_facet | Kim, Beom Suk Yu, Minhyeong Kim, Sunwoo Yoon, Joon Shik Baek, Seungjun |
author_sort | Kim, Beom Suk |
collection | PubMed |
description | PURPOSE: The aim of this study was to develop a neural network that accurately and effectively segments the median nerve in ultrasound (US) images. METHODS: In total, 1,305 images of the median nerve of 123 normal subjects were used to train and evaluate the model. Four datasets from two measurement regions (wrist and forearm) of the nerve and two US machines were used. The neural network was designed for high accuracy by combining information at multiple scales, as well as for high efficiency to prevent overfitting. The model was designed in two parts (cascaded and factorized convolutions), followed by self-attention over scale and channel features. The precision, recall, dice similarity coefficient (DSC), and Hausdorff distance (HD) were used as performance metrics. The area under the receiver operating characteristic curve (AUC) was also assessed. RESULTS: In the wrist datasets, the proposed network achieved 92.7% and 90.3% precision, 92.4% and 89.8% recall, DSCs of 92.3% and 89.7%, HDs of 5.158 and 4.966, and AUCs of 0.9755 and 0.9399 on two machines. In the forearm datasets, 79.3% and 87.8% precision, 76.0% and 85.0% recall, DSCs of 76.1% and 85.8%, HDs of 5.206 and 4.527, and AUCs of 0.8846 and 0.9150 were achieved. In all datasets, the model developed herein achieved better performance in terms of DSC than previous U-Net-based systems. CONCLUSION: The proposed neural network yields accurate segmentation results to assist clinicians in identifying the median nerve. |
format | Online Article Text |
id | pubmed-9532202 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Korean Society of Ultrasound in Medicine |
record_format | MEDLINE/PubMed |
spelling | pubmed-95322022022-10-13 Scale-attentional U-Net for the segmentation of the median nerve in ultrasound images Kim, Beom Suk Yu, Minhyeong Kim, Sunwoo Yoon, Joon Shik Baek, Seungjun Ultrasonography Original Article PURPOSE: The aim of this study was to develop a neural network that accurately and effectively segments the median nerve in ultrasound (US) images. METHODS: In total, 1,305 images of the median nerve of 123 normal subjects were used to train and evaluate the model. Four datasets from two measurement regions (wrist and forearm) of the nerve and two US machines were used. The neural network was designed for high accuracy by combining information at multiple scales, as well as for high efficiency to prevent overfitting. The model was designed in two parts (cascaded and factorized convolutions), followed by self-attention over scale and channel features. The precision, recall, dice similarity coefficient (DSC), and Hausdorff distance (HD) were used as performance metrics. The area under the receiver operating characteristic curve (AUC) was also assessed. RESULTS: In the wrist datasets, the proposed network achieved 92.7% and 90.3% precision, 92.4% and 89.8% recall, DSCs of 92.3% and 89.7%, HDs of 5.158 and 4.966, and AUCs of 0.9755 and 0.9399 on two machines. In the forearm datasets, 79.3% and 87.8% precision, 76.0% and 85.0% recall, DSCs of 76.1% and 85.8%, HDs of 5.206 and 4.527, and AUCs of 0.8846 and 0.9150 were achieved. In all datasets, the model developed herein achieved better performance in terms of DSC than previous U-Net-based systems. CONCLUSION: The proposed neural network yields accurate segmentation results to assist clinicians in identifying the median nerve. Korean Society of Ultrasound in Medicine 2022-10 2022-03-15 /pmc/articles/PMC9532202/ /pubmed/35754116 http://dx.doi.org/10.14366/usg.21214 Text en Copyright © 2022 Korean Society of Ultrasound in Medicine (KSUM) https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/ (https://creativecommons.org/licenses/by-nc/4.0/) ) which permits unrestricted noncommercial use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Article Kim, Beom Suk Yu, Minhyeong Kim, Sunwoo Yoon, Joon Shik Baek, Seungjun Scale-attentional U-Net for the segmentation of the median nerve in ultrasound images |
title | Scale-attentional U-Net for the segmentation of the median nerve in ultrasound images |
title_full | Scale-attentional U-Net for the segmentation of the median nerve in ultrasound images |
title_fullStr | Scale-attentional U-Net for the segmentation of the median nerve in ultrasound images |
title_full_unstemmed | Scale-attentional U-Net for the segmentation of the median nerve in ultrasound images |
title_short | Scale-attentional U-Net for the segmentation of the median nerve in ultrasound images |
title_sort | scale-attentional u-net for the segmentation of the median nerve in ultrasound images |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9532202/ https://www.ncbi.nlm.nih.gov/pubmed/35754116 http://dx.doi.org/10.14366/usg.21214 |
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