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Construction of a prediction model for drug removal rate in hemodialysis based on chemical structures
ABSTRACT: In designing drug dosing for hemodialysis patients, the removal rate (RR) of the drug by hemodialysis is important. However, acquiring the RR is difficult, and there is a need for an estimation method that can be used in clinical settings. In this study, the RR predictive model was constru...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9532302/ https://www.ncbi.nlm.nih.gov/pubmed/34973116 http://dx.doi.org/10.1007/s11030-021-10348-7 |
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author | Nishikiori, Kousuke Tanaka, Kentaro Uesawa, Yoshihiro |
author_facet | Nishikiori, Kousuke Tanaka, Kentaro Uesawa, Yoshihiro |
author_sort | Nishikiori, Kousuke |
collection | PubMed |
description | ABSTRACT: In designing drug dosing for hemodialysis patients, the removal rate (RR) of the drug by hemodialysis is important. However, acquiring the RR is difficult, and there is a need for an estimation method that can be used in clinical settings. In this study, the RR predictive model was constructed using the RR of known drugs by quantitative structure–activity relationship (QSAR) analysis. Drugs were divided into a model construction drug set (75%) and a model validation drug set (25%). The RR was collected from 143 medicines. The objective variable (RR) and chemical structural characteristics (descriptors) of the drug (explanatory variable) were used to construct a prediction model using partial least squares (PLS) regression and artificial neural network (ANN) analyses. The determination coefficients in the PLS and ANN methods were 0.586 and 0.721 for the model validation drug set, respectively. QSAR analysis successfully constructed dialysis RR prediction models that were comparable or superior to those using pharmacokinetic parameters. Considering that the RR dataset contains potential errors, we believe that this study has achieved the most reliable RR prediction accuracy currently available. These predictive RR models can be achieved using only the chemical structure of the drug. This model is expected to be applied at the time of hemodialysis. GRAPHIC ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s11030-021-10348-7. |
format | Online Article Text |
id | pubmed-9532302 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-95323022022-10-06 Construction of a prediction model for drug removal rate in hemodialysis based on chemical structures Nishikiori, Kousuke Tanaka, Kentaro Uesawa, Yoshihiro Mol Divers Original Article ABSTRACT: In designing drug dosing for hemodialysis patients, the removal rate (RR) of the drug by hemodialysis is important. However, acquiring the RR is difficult, and there is a need for an estimation method that can be used in clinical settings. In this study, the RR predictive model was constructed using the RR of known drugs by quantitative structure–activity relationship (QSAR) analysis. Drugs were divided into a model construction drug set (75%) and a model validation drug set (25%). The RR was collected from 143 medicines. The objective variable (RR) and chemical structural characteristics (descriptors) of the drug (explanatory variable) were used to construct a prediction model using partial least squares (PLS) regression and artificial neural network (ANN) analyses. The determination coefficients in the PLS and ANN methods were 0.586 and 0.721 for the model validation drug set, respectively. QSAR analysis successfully constructed dialysis RR prediction models that were comparable or superior to those using pharmacokinetic parameters. Considering that the RR dataset contains potential errors, we believe that this study has achieved the most reliable RR prediction accuracy currently available. These predictive RR models can be achieved using only the chemical structure of the drug. This model is expected to be applied at the time of hemodialysis. GRAPHIC ABSTRACT: [Image: see text] SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s11030-021-10348-7. Springer International Publishing 2022-01-01 2022 /pmc/articles/PMC9532302/ /pubmed/34973116 http://dx.doi.org/10.1007/s11030-021-10348-7 Text en © The Author(s) 2021 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Original Article Nishikiori, Kousuke Tanaka, Kentaro Uesawa, Yoshihiro Construction of a prediction model for drug removal rate in hemodialysis based on chemical structures |
title | Construction of a prediction model for drug removal rate in hemodialysis based on chemical structures |
title_full | Construction of a prediction model for drug removal rate in hemodialysis based on chemical structures |
title_fullStr | Construction of a prediction model for drug removal rate in hemodialysis based on chemical structures |
title_full_unstemmed | Construction of a prediction model for drug removal rate in hemodialysis based on chemical structures |
title_short | Construction of a prediction model for drug removal rate in hemodialysis based on chemical structures |
title_sort | construction of a prediction model for drug removal rate in hemodialysis based on chemical structures |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9532302/ https://www.ncbi.nlm.nih.gov/pubmed/34973116 http://dx.doi.org/10.1007/s11030-021-10348-7 |
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