Cargando…

BLNIMDA: identifying miRNA-disease associations based on weighted bi-level network

BACKGROUND: MicroRNAs (miRNAs) have been confirmed to be inextricably linked to the emergence of human complex diseases. The identification of the disease-related miRNAs has gradually become a routine way to unveil the genetic mechanisms of examined disorders. METHODS: In this study, a method BLNIMD...

Descripción completa

Detalles Bibliográficos
Autores principales:	Shang, Junliang, Yang, Yi, Li, Feng, Guan, Boxin, Liu, Jin-Xing, Sun, Yan
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2022
Materias:	Research
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9533620/ https://www.ncbi.nlm.nih.gov/pubmed/36199016 http://dx.doi.org/10.1186/s12864-022-08908-8

Ejemplares similares

TLNPMD: Prediction of miRNA-Disease Associations Based on miRNA-Drug-Disease Three-Layer Heterogeneous Network
por: Yang, Yi, et al.
Publicado: (2022)

Weighted miRNA co-expression networks analysis identifies circulating miRNA predicting overall survival in hepatocellular carcinoma patients
por: Pascut, Devis, et al.
Publicado: (2020)

Network embedding framework for driver gene discovery by combining functional and structural information
por: Chu, Xin, et al.
Publicado: (2023)

Multi-Objective Artificial Bee Colony Algorithm Based on Scale-Free Network for Epistasis Detection
por: Gu, Yijun, et al.
Publicado: (2022)

Identification and Validation of miRNA-TF-mRNA Regulatory Networks in Uterine Fibroids
por: Peng, Xiaotong, et al.
Publicado: (2022)

MDSN: A Module Detection Method for Identifying High-Order Epistatic Interactions
por: Sun, Yan, et al.
Publicado: (2022)

Identifying miRNA-mRNA Networks Associated With COPD Phenotypes
por: Zhuang, Yonghua, et al.
Publicado: (2021)

Identifying of miRNA–mRNA Regulatory Networks Associated with Acute Kidney Injury by Weighted Gene Co-Expression Network Analysis
por: Xu, Jie, et al.
Publicado: (2022)

Integrated miRNA and mRNA expression profiling to identify mRNA targets of dysregulated miRNAs in pulmonary tuberculosis
por: Zhang, Xing, et al.
Publicado: (2018)

A novel lncRNA-miRNA-mRNA triple network identifies lncRNA TWF1 as an important regulator of miRNA and gene expression in coronary artery disease
por: Miao, Liu, et al.
Publicado: (2019)

Integrative Analysis of miRNA-mRNA and miRNA-miRNA Interactions
por: Guo, Li, et al.
Publicado: (2014)

miRsig: a consensus-based network inference methodology to identify pan-cancer miRNA-miRNA interaction signatures
por: Nalluri, Joseph J., et al.
Publicado: (2017)

MiRNA–miRNA synergistic network: construction via co-regulating functional modules and disease miRNA topological features
por: Xu, Juan, et al.
Publicado: (2011)

Identifying Interaction Clusters for MiRNA and MRNA Pairs in TCGA Network
por: Dai, Xinqing, et al.
Publicado: (2019)

Network potential identifies therapeutic miRNA cocktails in Ewing sarcoma
por: Weaver, Davis T., et al.
Publicado: (2021)

A Multi-Level Iterative Bi-Clustering Method for Discovering miRNA Co-regulation Network of Abiotic Stress Tolerance in Soybeans
por: Chang, Haowu, et al.
Publicado: (2022)

Discovering the ‘Dark matters’ in expression data of miRNA based on the miRNA-mRNA and miRNA-lncRNA networks
por: Pian, Cong, et al.
Publicado: (2018)

KSHV encoded miRNA single nucleotide polymorphisms identified in clinical samples can affect miRNA processing and level of expression
por: Marshall, Vickie, et al.
Publicado: (2012)

Comprehensive analysis of mRNA‐level and miRNA‐level subpathway activities for identifying robust ovarian cancer prognostic signatures
por: Tian, Songyu, et al.
Publicado: (2020)

NDAMDA: Network distance analysis for MiRNA‐disease association prediction
por: Chen, Xing, et al.
Publicado: (2018)

Identification of candidate miRNA biomarkers from miRNA regulatory network with application to prostate cancer
por: Zhang, Wenyu, et al.
Publicado: (2014)

miRConnect: Identifying Effector Genes of miRNAs and miRNA Families in Cancer Cells
por: Hua, Youjia, et al.
Publicado: (2011)

Analyzing miRNA co-expression networks to explore TF-miRNA regulation
por: Bandyopadhyay, Sanghamitra, et al.
Publicado: (2009)

miRNA sensitivity to Drosha levels correlates with pre-miRNA secondary structure
por: Sperber, Henrik, et al.
Publicado: (2014)

Identification of hub miRNA biomarkers for bladder cancer by weighted gene coexpression network analysis
por: Zhao, Feng, et al.
Publicado: (2017)

Identifying miRNA and gene modules of colon cancer associated with pathological stage by weighted gene co-expression network analysis
por: Zhou, Xian-guo, et al.
Publicado: (2018)

Paired miRNA- and messenger RNA-sequencing identifies novel miRNA-mRNA interactions in multiple myeloma
por: Aass, Kristin Roseth, et al.
Publicado: (2022)

RUNX oncoproteins and miRNA networks
por: Neil, James C., et al.
Publicado: (2017)

Nucleotide-level Convolutional Neural Networks for Pre-miRNA Classification
por: Zheng, Xueming, et al.
Publicado: (2019)

Identification of potential miRNA-mRNA regulatory network and the key miRNAs in intramuscular and subcutaneous adipose
por: Feng, Hui, et al.
Publicado: (2022)

miRNA–mRNA–protein dysregulated network in COPD in women
por: Li, Chuan Xing, et al.
Publicado: (2022)

Associations of miRNA-146a and miRNA-223 with Rheumatoid Arthritis and Their Predictive Values
por: Zhang, Haoshaqiang, et al.
Publicado: (2023)

miRdentify: high stringency miRNA predictor identifies several novel animal miRNAs
por: Hansen, Thomas B., et al.
Publicado: (2014)

Construction of miRNA-miRNA networks revealing the complexity of miRNA-mediated mechanisms in trastuzumab treated breast cancer cell lines
por: Cilek, Emine Ezel, et al.
Publicado: (2017)

Gene bi-targeting by viral and human miRNAs
por: Veksler-Lublinsky, Isana, et al.
Publicado: (2010)

Risk miRNA screening of ovarian cancer based on miRNA functional synergistic network
por: Ying, Huanchun, et al.
Publicado: (2014)

Recent Insights into Plant miRNA Biogenesis: Multiple Layers of miRNA Level Regulation
por: Bajczyk, Mateusz, et al.
Publicado: (2023)

Identifying circRNA–miRNA–mRNA Regulatory Networks in Chemotherapy-Induced Peripheral Neuropathy
por: Cao, Fei, et al.
Publicado: (2023)

Identifying Cancer Specific Functionally Relevant miRNAs from Gene Expression and miRNA-to-Gene Networks Using Regularized Regression
por: Mezlini, Aziz M., et al.
Publicado: (2013)

miRTar: an integrated system for identifying miRNA-target interactions in human
por: Hsu, Justin Bo-Kai, et al.
Publicado: (2011)

Cannot write session to /tmp/vufind_sessions/sess_k08m7dc57n1plnf0otp71jn17j