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Statistical inference using GLEaM model with spatial heterogeneity and correlation between regions

A better understanding of various patterns in the coronavirus disease 2019 (COVID-19) spread in different parts of the world is crucial to its prevention and control. Motivated by the previously developed Global Epidemic and Mobility (GLEaM) model, this paper proposes a new stochastic dynamic model...

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Autores principales: Tan, Yixuan, Zhang, Yuan, Cheng, Xiuyuan, Zhou, Xiao-Hua
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9534028/
https://www.ncbi.nlm.nih.gov/pubmed/36198691
http://dx.doi.org/10.1038/s41598-022-18775-8
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author Tan, Yixuan
Zhang, Yuan
Cheng, Xiuyuan
Zhou, Xiao-Hua
author_facet Tan, Yixuan
Zhang, Yuan
Cheng, Xiuyuan
Zhou, Xiao-Hua
author_sort Tan, Yixuan
collection PubMed
description A better understanding of various patterns in the coronavirus disease 2019 (COVID-19) spread in different parts of the world is crucial to its prevention and control. Motivated by the previously developed Global Epidemic and Mobility (GLEaM) model, this paper proposes a new stochastic dynamic model to depict the evolution of COVID-19. The model allows spatial and temporal heterogeneity of transmission parameters and involves transportation between regions. Based on the proposed model, this paper also designs a two-step procedure for parameter inference, which utilizes the correlation between regions through a prior distribution that imposes graph Laplacian regularization on transmission parameters. Experiments on simulated data and real-world data in China and Europe indicate that the proposed model achieves higher accuracy in predicting the newly confirmed cases than baseline models.
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spelling pubmed-95340282022-10-06 Statistical inference using GLEaM model with spatial heterogeneity and correlation between regions Tan, Yixuan Zhang, Yuan Cheng, Xiuyuan Zhou, Xiao-Hua Sci Rep Article A better understanding of various patterns in the coronavirus disease 2019 (COVID-19) spread in different parts of the world is crucial to its prevention and control. Motivated by the previously developed Global Epidemic and Mobility (GLEaM) model, this paper proposes a new stochastic dynamic model to depict the evolution of COVID-19. The model allows spatial and temporal heterogeneity of transmission parameters and involves transportation between regions. Based on the proposed model, this paper also designs a two-step procedure for parameter inference, which utilizes the correlation between regions through a prior distribution that imposes graph Laplacian regularization on transmission parameters. Experiments on simulated data and real-world data in China and Europe indicate that the proposed model achieves higher accuracy in predicting the newly confirmed cases than baseline models. Nature Publishing Group UK 2022-10-05 /pmc/articles/PMC9534028/ /pubmed/36198691 http://dx.doi.org/10.1038/s41598-022-18775-8 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Tan, Yixuan
Zhang, Yuan
Cheng, Xiuyuan
Zhou, Xiao-Hua
Statistical inference using GLEaM model with spatial heterogeneity and correlation between regions
title Statistical inference using GLEaM model with spatial heterogeneity and correlation between regions
title_full Statistical inference using GLEaM model with spatial heterogeneity and correlation between regions
title_fullStr Statistical inference using GLEaM model with spatial heterogeneity and correlation between regions
title_full_unstemmed Statistical inference using GLEaM model with spatial heterogeneity and correlation between regions
title_short Statistical inference using GLEaM model with spatial heterogeneity and correlation between regions
title_sort statistical inference using gleam model with spatial heterogeneity and correlation between regions
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9534028/
https://www.ncbi.nlm.nih.gov/pubmed/36198691
http://dx.doi.org/10.1038/s41598-022-18775-8
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