Cargando…

Overview of the COVID-19 text mining tool interactive demonstration track in BioCreative VII

The coronavirus disease 2019 (COVID-19) pandemic has compelled biomedical researchers to communicate data in real time to establish more effective medical treatments and public health policies. Nontraditional sources such as preprint publications, i.e. articles not yet validated by peer review, have...

Descripción completa

Detalles Bibliográficos
Autores principales:	Chatr-aryamontri, Andrew, Hirschman, Lynette, Ross, Karen E, Oughtred, Rose, Krallinger, Martin, Dolinski, Kara, Tyers, Mike, Korves, Tonia, Arighi, Cecilia N
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Oxford University Press 2022
Materias:	Original Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9534061/ https://www.ncbi.nlm.nih.gov/pubmed/36197453 http://dx.doi.org/10.1093/database/baac084

Ejemplares similares

How to link ontologies and protein–protein interactions to literature: text-mining approaches and the BioCreative experience
por: Krallinger, Martin, et al.
Publicado: (2012)

Overview of the BioCreative III Workshop
por: Arighi, Cecilia N, et al.
Publicado: (2011)

Benchmarking of the 2010 BioCreative Challenge III text-mining competition by the BioGRID and MINT interaction databases
por: Chatr-aryamontri, Andrew, et al.
Publicado: (2011)

Evaluation of text-mining systems for biology: overview of the Second BioCreative community challenge
por: Krallinger, Martin, et al.
Publicado: (2008)

BioCreative-IV virtual issue
por: Arighi, Cecilia N., et al.
Publicado: (2014)

BioCreative-2012 Virtual Issue
por: Wu, Cathy H., et al.
Publicado: (2012)

Biocuration workflows and text mining: overview of the BioCreative 2012 Workshop Track II
por: Lu, Zhiyong, et al.
Publicado: (2012)

BioCreative III interactive task: an overview
por: Arighi, Cecilia N, et al.
Publicado: (2011)

An overview of the BioCreative 2012 Workshop Track III: interactive text mining task
por: Arighi, Cecilia N., et al.
Publicado: (2013)

BioCreative V BioC track overview: collaborative biocurator assistant task for BioGRID
por: Kim, Sun, et al.
Publicado: (2016)

Overview of DrugProt task at BioCreative VII: data and methods for large-scale text mining and knowledge graph generation of heterogenous chemical–protein relations
por: Miranda-Escalada, Antonio, et al.
Publicado: (2023)

MINT and IntAct contribute to the Second BioCreative challenge: serving the text-mining community with high quality molecular interaction data
por: Chatr-aryamontri, Andrew, et al.
Publicado: (2008)

The BioC-BioGRID corpus: full text articles annotated for curation of protein–protein and genetic interactions
por: Islamaj Doğan, Rezarta, et al.
Publicado: (2017)

Overview of the interactive task in BioCreative V
por: Wang, Qinghua, et al.
Publicado: (2016)

The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text
por: Krallinger, Martin, et al.
Publicado: (2011)

Text mining for the biocuration workflow
por: Hirschman, Lynette, et al.
Publicado: (2012)

Overview of the BioCreative VI text-mining services for Kinome Curation Track
por: Gobeill, Julien, et al.
Publicado: (2018)

Systematic curation of protein and genetic interaction data for computable biology
por: Dolinski, Kara, et al.
Publicado: (2013)

Overview of BioCreative II gene normalization
por: Morgan, Alexander A, et al.
Publicado: (2008)

Overview of the BioCreative VI Precision Medicine Track: mining protein interactions and mutations for precision medicine
por: Islamaj Doğan, Rezarta, et al.
Publicado: (2019)

Overview of the protein-protein interaction annotation extraction task of BioCreative II
por: Krallinger, Martin, et al.
Publicado: (2008)

BC4GO: a full-text corpus for the BioCreative IV GO task
por: Van Auken, Kimberly, et al.
Publicado: (2014)

Linking genes to literature: text mining, information extraction, and retrieval applications for biology
por: Krallinger, Martin, et al.
Publicado: (2008)

OntoGene in BioCreative II
por: Rinaldi, Fabio, et al.
Publicado: (2008)

Overview of the gene ontology task at BioCreative IV
por: Mao, Yuqing, et al.
Publicado: (2014)

The gene normalization task in BioCreative III
por: Lu, Zhiyong, et al.
Publicado: (2011)

BioLMiner and the BioCreative II.5 challenge
por: Chen, Yifei, et al.
Publicado: (2010)

Automatic Extraction of Medication Mentions from Tweets—Overview of the BioCreative VII Shared Task 3 Competition
por: Weissenbacher, Davy, et al.
Publicado: (2023)

Overview of BioCreAtIvE: critical assessment of information extraction for biology
por: Hirschman, Lynette, et al.
Publicado: (2005)

The BioGRID interaction database: 2017 update
por: Chatr-aryamontri, Andrew, et al.
Publicado: (2017)

Overview of BioCreAtIvE task 1B: normalized gene lists
por: Hirschman, Lynette, et al.
Publicado: (2005)

BioCreAtIvE Task 1A: gene mention finding evaluation
por: Yeh, Alexander, et al.
Publicado: (2005)

Overview of BioCreative II gene mention recognition
por: Smith, Larry, et al.
Publicado: (2008)

The Markyt visualisation, prediction and benchmark platform for chemical and gene entity recognition at BioCreative/CHEMDNER challenge
por: Pérez-Pérez, Martin, et al.
Publicado: (2016)

A BERT-based ensemble learning approach for the BioCreative VII challenges: full-text chemical identification and multi-label classification in PubMed articles
por: Lin, Sheng-Jie, et al.
Publicado: (2022)

TopEx: topic exploration of COVID-19 corpora - Results from the BioCreative VII Challenge Track 4
por: Olex, Amy L, et al.
Publicado: (2022)

The BioGRID Interaction Database: 2011 update
por: Stark, Chris, et al.
Publicado: (2011)

The BioGRID database: A comprehensive biomedical resource of curated protein, genetic, and chemical interactions
por: Oughtred, Rose, et al.
Publicado: (2020)

Selected articles from the BioCreative/OHNLP challenge 2018
por: Liu, Sijia, et al.
Publicado: (2019)

Evaluation of BioCreAtIvE assessment of task 2
por: Blaschke, Christian, et al.
Publicado: (2005)

Cannot write session to /tmp/vufind_sessions/sess_6t9uj666ir1dad0ktjqtrjn7kv