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Multifaceted analyses reveal carbohydrate metabolism mainly affecting the quality of postharvest bamboo shoots
Bamboo shoot is one of nutritious vegetables in China. However, the edible quality of fresh bamboo shoots deteriorates easily after harvest. Here, morphological, physiological, transcriptomic and microRNA sequencing analyses were conducted to investigate the postharvest characteristics of moso bambo...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9535365/ https://www.ncbi.nlm.nih.gov/pubmed/36212302 http://dx.doi.org/10.3389/fpls.2022.1021161 |
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author | Li, Zhen Xu, Xiurong Yang, Kebin Zhu, Chenglei Liu, Yan Gao, Zhimin |
author_facet | Li, Zhen Xu, Xiurong Yang, Kebin Zhu, Chenglei Liu, Yan Gao, Zhimin |
author_sort | Li, Zhen |
collection | PubMed |
description | Bamboo shoot is one of nutritious vegetables in China. However, the edible quality of fresh bamboo shoots deteriorates easily after harvest. Here, morphological, physiological, transcriptomic and microRNA sequencing analyses were conducted to investigate the postharvest characteristics of moso bamboo (Phyllostachys edulis) shoots. Rapid decreases of soluble sugars, structural polysaccharides and hydrolyzed tannins, and increases of lignin and condensed tannins were observed in the postharvest bamboo shoots. Differentially expressed genes (DEGs) and miRNAs with opposite trends were mainly enriched in structural polysaccharide metabolism, starch and sucrose metabolism and glycolysis pathways, which were consistent with the changes of carbohydrates. A co-expression network of carbohydrate metabolism was constructed, which was verified by qPCR and yeast one-hybrid (Y1H) assay. Furthermore, the function of one hub glycosyltransferase gene was validated in Arabidopsis, which confirmed that it was involved in xylan biosynthesis. These results are of great significance for revealing the carbohydrate metabolism mechanisms of postharvest bamboo shoots and provide a potential candidate gene for molecular breeding related to xylan in the future. |
format | Online Article Text |
id | pubmed-9535365 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-95353652022-10-07 Multifaceted analyses reveal carbohydrate metabolism mainly affecting the quality of postharvest bamboo shoots Li, Zhen Xu, Xiurong Yang, Kebin Zhu, Chenglei Liu, Yan Gao, Zhimin Front Plant Sci Plant Science Bamboo shoot is one of nutritious vegetables in China. However, the edible quality of fresh bamboo shoots deteriorates easily after harvest. Here, morphological, physiological, transcriptomic and microRNA sequencing analyses were conducted to investigate the postharvest characteristics of moso bamboo (Phyllostachys edulis) shoots. Rapid decreases of soluble sugars, structural polysaccharides and hydrolyzed tannins, and increases of lignin and condensed tannins were observed in the postharvest bamboo shoots. Differentially expressed genes (DEGs) and miRNAs with opposite trends were mainly enriched in structural polysaccharide metabolism, starch and sucrose metabolism and glycolysis pathways, which were consistent with the changes of carbohydrates. A co-expression network of carbohydrate metabolism was constructed, which was verified by qPCR and yeast one-hybrid (Y1H) assay. Furthermore, the function of one hub glycosyltransferase gene was validated in Arabidopsis, which confirmed that it was involved in xylan biosynthesis. These results are of great significance for revealing the carbohydrate metabolism mechanisms of postharvest bamboo shoots and provide a potential candidate gene for molecular breeding related to xylan in the future. Frontiers Media S.A. 2022-09-21 /pmc/articles/PMC9535365/ /pubmed/36212302 http://dx.doi.org/10.3389/fpls.2022.1021161 Text en Copyright © 2022 Li, Xu, Yang, Zhu, Liu and Gao. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Plant Science Li, Zhen Xu, Xiurong Yang, Kebin Zhu, Chenglei Liu, Yan Gao, Zhimin Multifaceted analyses reveal carbohydrate metabolism mainly affecting the quality of postharvest bamboo shoots |
title | Multifaceted analyses reveal carbohydrate metabolism mainly affecting the quality of postharvest bamboo shoots |
title_full | Multifaceted analyses reveal carbohydrate metabolism mainly affecting the quality of postharvest bamboo shoots |
title_fullStr | Multifaceted analyses reveal carbohydrate metabolism mainly affecting the quality of postharvest bamboo shoots |
title_full_unstemmed | Multifaceted analyses reveal carbohydrate metabolism mainly affecting the quality of postharvest bamboo shoots |
title_short | Multifaceted analyses reveal carbohydrate metabolism mainly affecting the quality of postharvest bamboo shoots |
title_sort | multifaceted analyses reveal carbohydrate metabolism mainly affecting the quality of postharvest bamboo shoots |
topic | Plant Science |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9535365/ https://www.ncbi.nlm.nih.gov/pubmed/36212302 http://dx.doi.org/10.3389/fpls.2022.1021161 |
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