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Rapid and Accurate Estimation of Activation Free Energy in Hydrogen Atom Transfer-Based C–H Activation Reactions: From Empirical Model to Artificial Neural Networks
[Image: see text] A well-performing machine learning (ML) model is obtained by using proper descriptors and artificial neural network (ANN) algorithms, which can quickly and accurately predict activation free energy in hydrogen atom transfer (HAT)-based sp(3) C–H activation. Density functional theor...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9535641/ https://www.ncbi.nlm.nih.gov/pubmed/36211072 http://dx.doi.org/10.1021/acsomega.2c03252 |
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author | Ma, Siqi Wang, Shipeng Cao, Jiawei Liu, Fengjiao |
author_facet | Ma, Siqi Wang, Shipeng Cao, Jiawei Liu, Fengjiao |
author_sort | Ma, Siqi |
collection | PubMed |
description | [Image: see text] A well-performing machine learning (ML) model is obtained by using proper descriptors and artificial neural network (ANN) algorithms, which can quickly and accurately predict activation free energy in hydrogen atom transfer (HAT)-based sp(3) C–H activation. Density functional theory calculations (UωB97X-D) are used to establish the reaction system data sets of methoxyl (CH(3)O·), trifluoroethoxyl (CF(3)CH(2)O·), tert-butoxyl (tBuO·), and cumyloxyl (CumO·) radicals. The simplified Roberts’ equation proposed in our recent study works here [R(2) = 0.84, mean absolute error (MAE) = 0.85 kcal/mol]. Its performance is comparable with univariate Mulliken-type electronegativity (χ) with the ANN model. The ANN model with bond dissociation free energy, χ, α-unsaturation, and Nolan buried volume (%V(buried)) successively improves R(2) and MAE to 0.93 and 0.54 kcal/mol, respectively. It reproduces the test sets of trichloroethoxyl (CCl(3)CH(2)O·) with R(2) = 0.87 and MAE = 0.89 kcal/mol and accurately predicts the relative experimental barrier of the HAT reactions with CumO· and the site selectivity of CH(3)O·. |
format | Online Article Text |
id | pubmed-9535641 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-95356412022-10-07 Rapid and Accurate Estimation of Activation Free Energy in Hydrogen Atom Transfer-Based C–H Activation Reactions: From Empirical Model to Artificial Neural Networks Ma, Siqi Wang, Shipeng Cao, Jiawei Liu, Fengjiao ACS Omega [Image: see text] A well-performing machine learning (ML) model is obtained by using proper descriptors and artificial neural network (ANN) algorithms, which can quickly and accurately predict activation free energy in hydrogen atom transfer (HAT)-based sp(3) C–H activation. Density functional theory calculations (UωB97X-D) are used to establish the reaction system data sets of methoxyl (CH(3)O·), trifluoroethoxyl (CF(3)CH(2)O·), tert-butoxyl (tBuO·), and cumyloxyl (CumO·) radicals. The simplified Roberts’ equation proposed in our recent study works here [R(2) = 0.84, mean absolute error (MAE) = 0.85 kcal/mol]. Its performance is comparable with univariate Mulliken-type electronegativity (χ) with the ANN model. The ANN model with bond dissociation free energy, χ, α-unsaturation, and Nolan buried volume (%V(buried)) successively improves R(2) and MAE to 0.93 and 0.54 kcal/mol, respectively. It reproduces the test sets of trichloroethoxyl (CCl(3)CH(2)O·) with R(2) = 0.87 and MAE = 0.89 kcal/mol and accurately predicts the relative experimental barrier of the HAT reactions with CumO· and the site selectivity of CH(3)O·. American Chemical Society 2022-09-20 /pmc/articles/PMC9535641/ /pubmed/36211072 http://dx.doi.org/10.1021/acsomega.2c03252 Text en © 2022 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by-nc-nd/4.0/Permits non-commercial access and re-use, provided that author attribution and integrity are maintained; but does not permit creation of adaptations or other derivative works (https://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Ma, Siqi Wang, Shipeng Cao, Jiawei Liu, Fengjiao Rapid and Accurate Estimation of Activation Free Energy in Hydrogen Atom Transfer-Based C–H Activation Reactions: From Empirical Model to Artificial Neural Networks |
title | Rapid and Accurate
Estimation of Activation Free Energy
in Hydrogen Atom Transfer-Based C–H Activation Reactions: From
Empirical Model to Artificial Neural Networks |
title_full | Rapid and Accurate
Estimation of Activation Free Energy
in Hydrogen Atom Transfer-Based C–H Activation Reactions: From
Empirical Model to Artificial Neural Networks |
title_fullStr | Rapid and Accurate
Estimation of Activation Free Energy
in Hydrogen Atom Transfer-Based C–H Activation Reactions: From
Empirical Model to Artificial Neural Networks |
title_full_unstemmed | Rapid and Accurate
Estimation of Activation Free Energy
in Hydrogen Atom Transfer-Based C–H Activation Reactions: From
Empirical Model to Artificial Neural Networks |
title_short | Rapid and Accurate
Estimation of Activation Free Energy
in Hydrogen Atom Transfer-Based C–H Activation Reactions: From
Empirical Model to Artificial Neural Networks |
title_sort | rapid and accurate
estimation of activation free energy
in hydrogen atom transfer-based c–h activation reactions: from
empirical model to artificial neural networks |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9535641/ https://www.ncbi.nlm.nih.gov/pubmed/36211072 http://dx.doi.org/10.1021/acsomega.2c03252 |
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