SODA: a TypeScript/JavaScript library for visualizing biological sequence annotation

We present SODA, a lightweight and open-source visualization library for biological sequence annotations that enables straightforward development of flexible, dynamic and interactive web graphics. SODA is implemented in TypeScript and can be used as a library within TypeScript and JavaScript.

Detalles Bibliográficos
Autores principales: Roddy, Jack W, Lesica, George T, Wheeler, Travis J
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2022
Materias:
Application Notes
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9535774/
https://www.ncbi.nlm.nih.gov/pubmed/36212708
http://dx.doi.org/10.1093/nargab/lqac077
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author Roddy, Jack W
Lesica, George T
Wheeler, Travis J
author_facet Roddy, Jack W
Lesica, George T
Wheeler, Travis J
author_sort Roddy, Jack W
collection PubMed
description We present SODA, a lightweight and open-source visualization library for biological sequence annotations that enables straightforward development of flexible, dynamic and interactive web graphics. SODA is implemented in TypeScript and can be used as a library within TypeScript and JavaScript.
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spelling pubmed-95357742022-10-07 SODA: a TypeScript/JavaScript library for visualizing biological sequence annotation Roddy, Jack W Lesica, George T Wheeler, Travis J NAR Genom Bioinform Application Notes We present SODA, a lightweight and open-source visualization library for biological sequence annotations that enables straightforward development of flexible, dynamic and interactive web graphics. SODA is implemented in TypeScript and can be used as a library within TypeScript and JavaScript. Oxford University Press 2022-10-06 /pmc/articles/PMC9535774/ /pubmed/36212708 http://dx.doi.org/10.1093/nargab/lqac077 Text en © The Author(s) 2022. Published by Oxford University Press on behalf of NAR Genomics and Bioinformatics. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Application Notes
Roddy, Jack W
Lesica, George T
Wheeler, Travis J
SODA: a TypeScript/JavaScript library for visualizing biological sequence annotation
title SODA: a TypeScript/JavaScript library for visualizing biological sequence annotation
title_full SODA: a TypeScript/JavaScript library for visualizing biological sequence annotation
title_fullStr SODA: a TypeScript/JavaScript library for visualizing biological sequence annotation
title_full_unstemmed SODA: a TypeScript/JavaScript library for visualizing biological sequence annotation
title_short SODA: a TypeScript/JavaScript library for visualizing biological sequence annotation
title_sort soda: a typescript/javascript library for visualizing biological sequence annotation
topic Application Notes
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9535774/
https://www.ncbi.nlm.nih.gov/pubmed/36212708
http://dx.doi.org/10.1093/nargab/lqac077
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