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Genetic association of ANGPT2 with primary open-angle glaucoma
BACKGROUND: To determine the association of the ANGPT2 gene with primary open-angle glaucoma (POAG) in Chinese. METHODS: Six single-nucleotide polymorphisms (SNPs) in ANGPT2 (rs2515487, rs2922869, rs13255574, rs4455855, rs13269021, and rs11775442) were genotyped in a total of 2601 study subjects fro...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9535884/ https://www.ncbi.nlm.nih.gov/pubmed/36199153 http://dx.doi.org/10.1186/s40662-022-00309-y |
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author | He, Jing Na Ng, Tsz Kin Lu, Shi Yao Tam, Pancy Oi Sin Chan, Poemen P. Tham, Clement C. Pang, Chi Pui Chen, Li Jia Chu, Wai Kit |
author_facet | He, Jing Na Ng, Tsz Kin Lu, Shi Yao Tam, Pancy Oi Sin Chan, Poemen P. Tham, Clement C. Pang, Chi Pui Chen, Li Jia Chu, Wai Kit |
author_sort | He, Jing Na |
collection | PubMed |
description | BACKGROUND: To determine the association of the ANGPT2 gene with primary open-angle glaucoma (POAG) in Chinese. METHODS: Six single-nucleotide polymorphisms (SNPs) in ANGPT2 (rs2515487, rs2922869, rs13255574, rs4455855, rs13269021, and rs11775442) were genotyped in a total of 2601 study subjects from two cohorts. One is a Hong Kong Chinese cohort of 484 high tension glaucoma (HTG) and 537 normal tension glaucoma (NTG) patients, and 496 non-glaucoma control subjects. Another cohort is a Shantou Chinese cohort of 403 HTG and 135 NTG patients, and 543 non-glaucoma control subjects. Subgroup analysis by sex was conducted. Outcomes from different cohorts were combined for meta-analysis. RESULTS: The association of SNP rs11775442 with NTG in the Hong Kong cohort [P = 0.0498, OR = 1.24, 95% confidence interval (CI) 1.00–1.55] after adjusting for age and sex did not reach statistical significance after Bonferroni correction. Other SNPs were not significantly associated with NTG, HTG and POAG in individual cohort or in the combined analyses (P > 0.05). In the subgroup analysis by sex, SNP rs13269021 in the Shantou cohort, but not in the Hong Kong cohort, was significantly associated with NTG in males (P = 0.0081, OR = 1.67, 95% CI: 1.14–2.43) but not in females (P = 0.874). In the combined analyses by sex, no SNPs were significantly associated with NTG, HTG and POAG. CONCLUSIONS: In the subgroup analysis by sex, a significant association was shown in SNP rs13269021 with NTG in Shantou males, but not in Hong Kong males. Further studies are needed to verify the association between ANGPT2 locus (rs13269021) and NTG in Chinese males. |
format | Online Article Text |
id | pubmed-9535884 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-95358842022-10-07 Genetic association of ANGPT2 with primary open-angle glaucoma He, Jing Na Ng, Tsz Kin Lu, Shi Yao Tam, Pancy Oi Sin Chan, Poemen P. Tham, Clement C. Pang, Chi Pui Chen, Li Jia Chu, Wai Kit Eye Vis (Lond) Research BACKGROUND: To determine the association of the ANGPT2 gene with primary open-angle glaucoma (POAG) in Chinese. METHODS: Six single-nucleotide polymorphisms (SNPs) in ANGPT2 (rs2515487, rs2922869, rs13255574, rs4455855, rs13269021, and rs11775442) were genotyped in a total of 2601 study subjects from two cohorts. One is a Hong Kong Chinese cohort of 484 high tension glaucoma (HTG) and 537 normal tension glaucoma (NTG) patients, and 496 non-glaucoma control subjects. Another cohort is a Shantou Chinese cohort of 403 HTG and 135 NTG patients, and 543 non-glaucoma control subjects. Subgroup analysis by sex was conducted. Outcomes from different cohorts were combined for meta-analysis. RESULTS: The association of SNP rs11775442 with NTG in the Hong Kong cohort [P = 0.0498, OR = 1.24, 95% confidence interval (CI) 1.00–1.55] after adjusting for age and sex did not reach statistical significance after Bonferroni correction. Other SNPs were not significantly associated with NTG, HTG and POAG in individual cohort or in the combined analyses (P > 0.05). In the subgroup analysis by sex, SNP rs13269021 in the Shantou cohort, but not in the Hong Kong cohort, was significantly associated with NTG in males (P = 0.0081, OR = 1.67, 95% CI: 1.14–2.43) but not in females (P = 0.874). In the combined analyses by sex, no SNPs were significantly associated with NTG, HTG and POAG. CONCLUSIONS: In the subgroup analysis by sex, a significant association was shown in SNP rs13269021 with NTG in Shantou males, but not in Hong Kong males. Further studies are needed to verify the association between ANGPT2 locus (rs13269021) and NTG in Chinese males. BioMed Central 2022-10-06 /pmc/articles/PMC9535884/ /pubmed/36199153 http://dx.doi.org/10.1186/s40662-022-00309-y Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data. |
spellingShingle | Research He, Jing Na Ng, Tsz Kin Lu, Shi Yao Tam, Pancy Oi Sin Chan, Poemen P. Tham, Clement C. Pang, Chi Pui Chen, Li Jia Chu, Wai Kit Genetic association of ANGPT2 with primary open-angle glaucoma |
title | Genetic association of ANGPT2 with primary open-angle glaucoma |
title_full | Genetic association of ANGPT2 with primary open-angle glaucoma |
title_fullStr | Genetic association of ANGPT2 with primary open-angle glaucoma |
title_full_unstemmed | Genetic association of ANGPT2 with primary open-angle glaucoma |
title_short | Genetic association of ANGPT2 with primary open-angle glaucoma |
title_sort | genetic association of angpt2 with primary open-angle glaucoma |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9535884/ https://www.ncbi.nlm.nih.gov/pubmed/36199153 http://dx.doi.org/10.1186/s40662-022-00309-y |
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