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Proteomic analysis response of rice (Oryza sativa) leaves to ultraviolet-B radiation stress

Rice (Oryza sativa) is a human staple food and serves as a model organism for genetic and molecular studies. Few studies have been conducted to determine the effects of ultraviolet-B (UV-B) stress on rice. UV-B stress triggers morphological and physiological changes in plants. However, the underlyin...

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Autores principales: Sah, Saroj Kumar, Jumaa, Salah, Li, Jiaxu, Reddy, K. Raja
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9536139/
https://www.ncbi.nlm.nih.gov/pubmed/36212327
http://dx.doi.org/10.3389/fpls.2022.871331
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author Sah, Saroj Kumar
Jumaa, Salah
Li, Jiaxu
Reddy, K. Raja
author_facet Sah, Saroj Kumar
Jumaa, Salah
Li, Jiaxu
Reddy, K. Raja
author_sort Sah, Saroj Kumar
collection PubMed
description Rice (Oryza sativa) is a human staple food and serves as a model organism for genetic and molecular studies. Few studies have been conducted to determine the effects of ultraviolet-B (UV-B) stress on rice. UV-B stress triggers morphological and physiological changes in plants. However, the underlying mechanisms governing these integrated responses are unknown. In this study, we conducted a proteomic response of rice leaves to UV-B stress using two-dimensional gel electrophoresis and identified the selected proteins by mass spectrometry analysis. Four levels of daily biologically effective UV-B radiation intensities were imposed to determine changes in protein accumulation in response to UV-B stress: 0 (control), 5, 10, and 15 kJ m(−2) d(−1)in two cultivars, i.e., IR6 and REX. To mimic the natural environment, we conducted this experiment in Sunlit Soil-Plant-Atmosphere-Research (SPAR) chambers. Among the identified proteins, 11% of differentially expressed proteins were found in both cultivars. In the Rex cultivar, only 45% of proteins are differentially expressed, while only 27.5% were expressed in IR6. The results indicate that REX is more affected by UV-B stress than IR6 cultivars. The identified protein TSJT1 (spot 16) in both cultivars plays a crucial role in plant growth and development during stress treatment. Additionally, we found that UV-B stress altered many antioxidant enzymes associated with redox homeostasis and cell defense response. Another enzyme, the glyceraldehyde-3-phosphate dehydrogenase (GAPDH), has been identified as spot 15, which plays an essential role in glycolysis and cellular energy production. Another vital protein identified is glycosyl hydrolase (GH) as spot 9, which catalyzes the hydrolysis of glycosidic bonds in cell wall polymers and significantly affects cell wall architecture. Some identified proteins are related to photosynthesis, protein biosynthesis, signal transduction, and stress response. The findings of our study provide new insights into understanding how rice plants are tailored to UV-B stress via modulating the expression of UV-B responsive proteins, which will help develop superior rice breeds in the future to combat UV-B stress. Data are available via ProteomeXchange with identifier PXD032163.
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spelling pubmed-95361392022-10-07 Proteomic analysis response of rice (Oryza sativa) leaves to ultraviolet-B radiation stress Sah, Saroj Kumar Jumaa, Salah Li, Jiaxu Reddy, K. Raja Front Plant Sci Plant Science Rice (Oryza sativa) is a human staple food and serves as a model organism for genetic and molecular studies. Few studies have been conducted to determine the effects of ultraviolet-B (UV-B) stress on rice. UV-B stress triggers morphological and physiological changes in plants. However, the underlying mechanisms governing these integrated responses are unknown. In this study, we conducted a proteomic response of rice leaves to UV-B stress using two-dimensional gel electrophoresis and identified the selected proteins by mass spectrometry analysis. Four levels of daily biologically effective UV-B radiation intensities were imposed to determine changes in protein accumulation in response to UV-B stress: 0 (control), 5, 10, and 15 kJ m(−2) d(−1)in two cultivars, i.e., IR6 and REX. To mimic the natural environment, we conducted this experiment in Sunlit Soil-Plant-Atmosphere-Research (SPAR) chambers. Among the identified proteins, 11% of differentially expressed proteins were found in both cultivars. In the Rex cultivar, only 45% of proteins are differentially expressed, while only 27.5% were expressed in IR6. The results indicate that REX is more affected by UV-B stress than IR6 cultivars. The identified protein TSJT1 (spot 16) in both cultivars plays a crucial role in plant growth and development during stress treatment. Additionally, we found that UV-B stress altered many antioxidant enzymes associated with redox homeostasis and cell defense response. Another enzyme, the glyceraldehyde-3-phosphate dehydrogenase (GAPDH), has been identified as spot 15, which plays an essential role in glycolysis and cellular energy production. Another vital protein identified is glycosyl hydrolase (GH) as spot 9, which catalyzes the hydrolysis of glycosidic bonds in cell wall polymers and significantly affects cell wall architecture. Some identified proteins are related to photosynthesis, protein biosynthesis, signal transduction, and stress response. The findings of our study provide new insights into understanding how rice plants are tailored to UV-B stress via modulating the expression of UV-B responsive proteins, which will help develop superior rice breeds in the future to combat UV-B stress. Data are available via ProteomeXchange with identifier PXD032163. Frontiers Media S.A. 2022-09-15 /pmc/articles/PMC9536139/ /pubmed/36212327 http://dx.doi.org/10.3389/fpls.2022.871331 Text en Copyright © 2022 Sah, Jumaa, Li and Reddy. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Sah, Saroj Kumar
Jumaa, Salah
Li, Jiaxu
Reddy, K. Raja
Proteomic analysis response of rice (Oryza sativa) leaves to ultraviolet-B radiation stress
title Proteomic analysis response of rice (Oryza sativa) leaves to ultraviolet-B radiation stress
title_full Proteomic analysis response of rice (Oryza sativa) leaves to ultraviolet-B radiation stress
title_fullStr Proteomic analysis response of rice (Oryza sativa) leaves to ultraviolet-B radiation stress
title_full_unstemmed Proteomic analysis response of rice (Oryza sativa) leaves to ultraviolet-B radiation stress
title_short Proteomic analysis response of rice (Oryza sativa) leaves to ultraviolet-B radiation stress
title_sort proteomic analysis response of rice (oryza sativa) leaves to ultraviolet-b radiation stress
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9536139/
https://www.ncbi.nlm.nih.gov/pubmed/36212327
http://dx.doi.org/10.3389/fpls.2022.871331
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