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Identification of CeRNA Regulatory Networks in Atrial Fibrillation Using Nanodelivery
The initiation and maintenance of AF is a complex biological process that is the ultimate manifestation of many cardiovascular diseases. And the pathogenesis of atrial fibrillation (AF) is unclear. Therefore, this study aimed to find the potential competing endogenous RNAs (ceRNAs) network and molec...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Hindawi
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9536897/ https://www.ncbi.nlm.nih.gov/pubmed/36212960 http://dx.doi.org/10.1155/2022/1046905 |
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author | Lin, Ping Meng, Lingqiang Lyu, Lei |
author_facet | Lin, Ping Meng, Lingqiang Lyu, Lei |
author_sort | Lin, Ping |
collection | PubMed |
description | The initiation and maintenance of AF is a complex biological process that is the ultimate manifestation of many cardiovascular diseases. And the pathogenesis of atrial fibrillation (AF) is unclear. Therefore, this study aimed to find the potential competing endogenous RNAs (ceRNAs) network and molecular dysregulation mechanism associated with AF. GSE135445, GSE2240, and GSE68475 were obtained from the Gene Expression Omnibus (GEO). Differential analysis was utilized to identify the differentially expressed mRNAs, miRNAs, and lncRNAs between AF and sinus rhythms (SR). AF-associated mRNAs and nanomaterials were screened and their biological functions and KEGG signaling pathways were identified. Nanomaterials for targeted delivery are uniquely capable of localizing the delivery of therapeutics and diagnostics to diseased tissues. The target mRNAs and target lncRNAs of differentially expressed miRNAs were identified using TargetScan and LncBase databases. Finally, we constructed the ceRNAs network and its potential molecular regulatory mechanism. We obtained 643 AF-associated mRNAs. They were significantly involved in focal adhesion and the PI3K-Akt signaling pathway. Among the 16 differentially expressed miRNAs identified, 31 differentially expressed target mRNAs, as well as 5 differentially expressed target lncRNAs were identified. Among them, we obtained 2 ceRNAs networks (hsa-miR-125a-5p and hsa-let-7a-3p). The aberrant expression of network target genes in AF mainly activated the HIF-1 signaling pathway. We speculated that the interaction pairs of miR-125a-5p and let-7a-3p with target mRNAs and target lncRNAs may be involved in AF. Our findings have a positive influence on investigating the pathogenesis of AF and identifying potential therapeutic targets. |
format | Online Article Text |
id | pubmed-9536897 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-95368972022-10-07 Identification of CeRNA Regulatory Networks in Atrial Fibrillation Using Nanodelivery Lin, Ping Meng, Lingqiang Lyu, Lei Evid Based Complement Alternat Med Research Article The initiation and maintenance of AF is a complex biological process that is the ultimate manifestation of many cardiovascular diseases. And the pathogenesis of atrial fibrillation (AF) is unclear. Therefore, this study aimed to find the potential competing endogenous RNAs (ceRNAs) network and molecular dysregulation mechanism associated with AF. GSE135445, GSE2240, and GSE68475 were obtained from the Gene Expression Omnibus (GEO). Differential analysis was utilized to identify the differentially expressed mRNAs, miRNAs, and lncRNAs between AF and sinus rhythms (SR). AF-associated mRNAs and nanomaterials were screened and their biological functions and KEGG signaling pathways were identified. Nanomaterials for targeted delivery are uniquely capable of localizing the delivery of therapeutics and diagnostics to diseased tissues. The target mRNAs and target lncRNAs of differentially expressed miRNAs were identified using TargetScan and LncBase databases. Finally, we constructed the ceRNAs network and its potential molecular regulatory mechanism. We obtained 643 AF-associated mRNAs. They were significantly involved in focal adhesion and the PI3K-Akt signaling pathway. Among the 16 differentially expressed miRNAs identified, 31 differentially expressed target mRNAs, as well as 5 differentially expressed target lncRNAs were identified. Among them, we obtained 2 ceRNAs networks (hsa-miR-125a-5p and hsa-let-7a-3p). The aberrant expression of network target genes in AF mainly activated the HIF-1 signaling pathway. We speculated that the interaction pairs of miR-125a-5p and let-7a-3p with target mRNAs and target lncRNAs may be involved in AF. Our findings have a positive influence on investigating the pathogenesis of AF and identifying potential therapeutic targets. Hindawi 2022-09-29 /pmc/articles/PMC9536897/ /pubmed/36212960 http://dx.doi.org/10.1155/2022/1046905 Text en Copyright © 2022 Ping Lin et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Lin, Ping Meng, Lingqiang Lyu, Lei Identification of CeRNA Regulatory Networks in Atrial Fibrillation Using Nanodelivery |
title | Identification of CeRNA Regulatory Networks in Atrial Fibrillation Using Nanodelivery |
title_full | Identification of CeRNA Regulatory Networks in Atrial Fibrillation Using Nanodelivery |
title_fullStr | Identification of CeRNA Regulatory Networks in Atrial Fibrillation Using Nanodelivery |
title_full_unstemmed | Identification of CeRNA Regulatory Networks in Atrial Fibrillation Using Nanodelivery |
title_short | Identification of CeRNA Regulatory Networks in Atrial Fibrillation Using Nanodelivery |
title_sort | identification of cerna regulatory networks in atrial fibrillation using nanodelivery |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9536897/ https://www.ncbi.nlm.nih.gov/pubmed/36212960 http://dx.doi.org/10.1155/2022/1046905 |
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