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Detecting and mitigating simultaneous waves of COVID-19 infections

The sudden spread of COVID-19 infections in a region can catch its healthcare system by surprise. Can one anticipate such a spread and allow healthcare administrators to prepare for a surge a priori? We posit that the answer lies in distinguishing between two types of waves in epidemic dynamics. The...

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Autores principales: Souyris, Sebastian, Hao, Shuai, Bose, Subhonmesh, England, Albert Charles III, Ivanov, Anton, Mukherjee, Ujjal Kumar, Seshadri, Sridhar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9537162/
https://www.ncbi.nlm.nih.gov/pubmed/36202867
http://dx.doi.org/10.1038/s41598-022-20224-5
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author Souyris, Sebastian
Hao, Shuai
Bose, Subhonmesh
England, Albert Charles III
Ivanov, Anton
Mukherjee, Ujjal Kumar
Seshadri, Sridhar
author_facet Souyris, Sebastian
Hao, Shuai
Bose, Subhonmesh
England, Albert Charles III
Ivanov, Anton
Mukherjee, Ujjal Kumar
Seshadri, Sridhar
author_sort Souyris, Sebastian
collection PubMed
description The sudden spread of COVID-19 infections in a region can catch its healthcare system by surprise. Can one anticipate such a spread and allow healthcare administrators to prepare for a surge a priori? We posit that the answer lies in distinguishing between two types of waves in epidemic dynamics. The first kind resembles a spatio-temporal diffusion pattern. Its gradual spread allows administrators to marshal resources to combat the epidemic. The second kind is caused by super-spreader events, which provide shocks to the disease propagation dynamics. Such shocks simultaneously affect a large geographical region and leave little time for the healthcare system to respond. We use time-series analysis and epidemiological model estimation to detect and react to such simultaneous waves using COVID-19 data from the time when the B.1.617.2 (Delta) variant of the SARS-CoV-2 virus dominated the spread. We first analyze India’s second wave from April to May 2021 that overwhelmed the Indian healthcare system. Then, we analyze data of COVID-19 infections in the United States (US) and countries with a high and low Indian diaspora. We identify the Kumbh Mela festival as the likely super-spreader event, the exogenous shock, behind India’s second wave. We show that a multi-area compartmental epidemiological model does not fit such shock-induced disease dynamics well, in contrast to its performance with diffusion-type spread. The insufficient fit to infection data can be detected in the early stages of a shock-wave propagation and can be used as an early warning sign, providing valuable time for a planned healthcare response. Our analysis of COVID-19 infections in the US reveals that simultaneous waves due to super-spreader events in one country (India) can lead to simultaneous waves in other places. The US wave in the summer of 2021 does not fit a diffusion pattern either. We postulate that international travels from India may have caused this wave. To support that hypothesis, we demonstrate that countries with a high Indian diaspora exhibit infection growth soon after India’s second wave, compared to countries with a low Indian diaspora. Based on our data analysis, we provide concrete policy recommendations at various stages of a simultaneous wave, including how to avoid it, how to detect it quickly after a potential super-spreader event occurs, and how to proactively contain its spread.
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spelling pubmed-95371622022-10-08 Detecting and mitigating simultaneous waves of COVID-19 infections Souyris, Sebastian Hao, Shuai Bose, Subhonmesh England, Albert Charles III Ivanov, Anton Mukherjee, Ujjal Kumar Seshadri, Sridhar Sci Rep Article The sudden spread of COVID-19 infections in a region can catch its healthcare system by surprise. Can one anticipate such a spread and allow healthcare administrators to prepare for a surge a priori? We posit that the answer lies in distinguishing between two types of waves in epidemic dynamics. The first kind resembles a spatio-temporal diffusion pattern. Its gradual spread allows administrators to marshal resources to combat the epidemic. The second kind is caused by super-spreader events, which provide shocks to the disease propagation dynamics. Such shocks simultaneously affect a large geographical region and leave little time for the healthcare system to respond. We use time-series analysis and epidemiological model estimation to detect and react to such simultaneous waves using COVID-19 data from the time when the B.1.617.2 (Delta) variant of the SARS-CoV-2 virus dominated the spread. We first analyze India’s second wave from April to May 2021 that overwhelmed the Indian healthcare system. Then, we analyze data of COVID-19 infections in the United States (US) and countries with a high and low Indian diaspora. We identify the Kumbh Mela festival as the likely super-spreader event, the exogenous shock, behind India’s second wave. We show that a multi-area compartmental epidemiological model does not fit such shock-induced disease dynamics well, in contrast to its performance with diffusion-type spread. The insufficient fit to infection data can be detected in the early stages of a shock-wave propagation and can be used as an early warning sign, providing valuable time for a planned healthcare response. Our analysis of COVID-19 infections in the US reveals that simultaneous waves due to super-spreader events in one country (India) can lead to simultaneous waves in other places. The US wave in the summer of 2021 does not fit a diffusion pattern either. We postulate that international travels from India may have caused this wave. To support that hypothesis, we demonstrate that countries with a high Indian diaspora exhibit infection growth soon after India’s second wave, compared to countries with a low Indian diaspora. Based on our data analysis, we provide concrete policy recommendations at various stages of a simultaneous wave, including how to avoid it, how to detect it quickly after a potential super-spreader event occurs, and how to proactively contain its spread. Nature Publishing Group UK 2022-10-06 /pmc/articles/PMC9537162/ /pubmed/36202867 http://dx.doi.org/10.1038/s41598-022-20224-5 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Souyris, Sebastian
Hao, Shuai
Bose, Subhonmesh
England, Albert Charles III
Ivanov, Anton
Mukherjee, Ujjal Kumar
Seshadri, Sridhar
Detecting and mitigating simultaneous waves of COVID-19 infections
title Detecting and mitigating simultaneous waves of COVID-19 infections
title_full Detecting and mitigating simultaneous waves of COVID-19 infections
title_fullStr Detecting and mitigating simultaneous waves of COVID-19 infections
title_full_unstemmed Detecting and mitigating simultaneous waves of COVID-19 infections
title_short Detecting and mitigating simultaneous waves of COVID-19 infections
title_sort detecting and mitigating simultaneous waves of covid-19 infections
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9537162/
https://www.ncbi.nlm.nih.gov/pubmed/36202867
http://dx.doi.org/10.1038/s41598-022-20224-5
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