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A deep learning approach to median nerve evaluation in ultrasound images of carpal tunnel inlet
Ultrasound (US) imaging is recognized as a useful support for Carpal Tunnel Syndrome (CTS) assessment through the evaluation of median nerve morphology. However, US is still far to be systematically adopted to evaluate this common entrapment neuropathy, due to US intrinsic challenges, such as its op...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9537213/ https://www.ncbi.nlm.nih.gov/pubmed/36152237 http://dx.doi.org/10.1007/s11517-022-02662-5 |
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author | Di Cosmo, Mariachiara Fiorentino, Maria Chiara Villani, Francesca Pia Frontoni, Emanuele Smerilli, Gianluca Filippucci, Emilio Moccia, Sara |
author_facet | Di Cosmo, Mariachiara Fiorentino, Maria Chiara Villani, Francesca Pia Frontoni, Emanuele Smerilli, Gianluca Filippucci, Emilio Moccia, Sara |
author_sort | Di Cosmo, Mariachiara |
collection | PubMed |
description | Ultrasound (US) imaging is recognized as a useful support for Carpal Tunnel Syndrome (CTS) assessment through the evaluation of median nerve morphology. However, US is still far to be systematically adopted to evaluate this common entrapment neuropathy, due to US intrinsic challenges, such as its operator dependency and the lack of standard protocols. To support sonographers, the present study proposes a fully-automatic deep learning approach to median nerve segmentation from US images. We collected and annotated a dataset of 246 images acquired in clinical practice involving 103 rheumatic patients, regardless of anatomical variants (bifid nerve, closed vessels). We developed a Mask R-CNN with two additional transposed layers at segmentation head to accurately segment the median nerve directly on transverse US images. We calculated the cross-sectional area (CSA) of the predicted median nerve. Proposed model achieved good performances both in median nerve detection and segmentation: Precision (Prec), Recall (Rec), Mean Average Precision (mAP) and Dice Similarity Coefficient (DSC) values are 0.916 ± 0.245, 0.938 ± 0.233, 0.936 ± 0.235 and 0.868 ± 0.201, respectively. The CSA values measured on true positive predictions were comparable with the sonographer manual measurements with a mean absolute error (MAE) of 0.918 mm(2). Experimental results showed the potential of proposed model, which identified and segmented the median nerve section in normal anatomy images, while still struggling when dealing with infrequent anatomical variants. Future research will expand the dataset including a wider spectrum of normal anatomy and pathology to support sonographers in daily practice. GRAPHICAL ABSTRACT: [Image: see text] |
format | Online Article Text |
id | pubmed-9537213 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-95372132022-10-08 A deep learning approach to median nerve evaluation in ultrasound images of carpal tunnel inlet Di Cosmo, Mariachiara Fiorentino, Maria Chiara Villani, Francesca Pia Frontoni, Emanuele Smerilli, Gianluca Filippucci, Emilio Moccia, Sara Med Biol Eng Comput Original Article Ultrasound (US) imaging is recognized as a useful support for Carpal Tunnel Syndrome (CTS) assessment through the evaluation of median nerve morphology. However, US is still far to be systematically adopted to evaluate this common entrapment neuropathy, due to US intrinsic challenges, such as its operator dependency and the lack of standard protocols. To support sonographers, the present study proposes a fully-automatic deep learning approach to median nerve segmentation from US images. We collected and annotated a dataset of 246 images acquired in clinical practice involving 103 rheumatic patients, regardless of anatomical variants (bifid nerve, closed vessels). We developed a Mask R-CNN with two additional transposed layers at segmentation head to accurately segment the median nerve directly on transverse US images. We calculated the cross-sectional area (CSA) of the predicted median nerve. Proposed model achieved good performances both in median nerve detection and segmentation: Precision (Prec), Recall (Rec), Mean Average Precision (mAP) and Dice Similarity Coefficient (DSC) values are 0.916 ± 0.245, 0.938 ± 0.233, 0.936 ± 0.235 and 0.868 ± 0.201, respectively. The CSA values measured on true positive predictions were comparable with the sonographer manual measurements with a mean absolute error (MAE) of 0.918 mm(2). Experimental results showed the potential of proposed model, which identified and segmented the median nerve section in normal anatomy images, while still struggling when dealing with infrequent anatomical variants. Future research will expand the dataset including a wider spectrum of normal anatomy and pathology to support sonographers in daily practice. GRAPHICAL ABSTRACT: [Image: see text] Springer Berlin Heidelberg 2022-09-24 2022 /pmc/articles/PMC9537213/ /pubmed/36152237 http://dx.doi.org/10.1007/s11517-022-02662-5 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Original Article Di Cosmo, Mariachiara Fiorentino, Maria Chiara Villani, Francesca Pia Frontoni, Emanuele Smerilli, Gianluca Filippucci, Emilio Moccia, Sara A deep learning approach to median nerve evaluation in ultrasound images of carpal tunnel inlet |
title | A deep learning approach to median nerve evaluation in ultrasound images of carpal tunnel inlet |
title_full | A deep learning approach to median nerve evaluation in ultrasound images of carpal tunnel inlet |
title_fullStr | A deep learning approach to median nerve evaluation in ultrasound images of carpal tunnel inlet |
title_full_unstemmed | A deep learning approach to median nerve evaluation in ultrasound images of carpal tunnel inlet |
title_short | A deep learning approach to median nerve evaluation in ultrasound images of carpal tunnel inlet |
title_sort | deep learning approach to median nerve evaluation in ultrasound images of carpal tunnel inlet |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9537213/ https://www.ncbi.nlm.nih.gov/pubmed/36152237 http://dx.doi.org/10.1007/s11517-022-02662-5 |
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