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Evaluation of two semi-supervised learning methods and their combination for automatic classification of bone marrow cells
Differential bone marrow (BM) cell counting is an important test for the diagnosis of various hematological diseases. However, it is difficult to accurately classify BM cells due to non-uniformity and the lack of reproducibility of differential counting. Therefore, automatic classification systems h...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9537320/ https://www.ncbi.nlm.nih.gov/pubmed/36202847 http://dx.doi.org/10.1038/s41598-022-20651-4 |
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author | Nakamura, Iori Ida, Haruhi Yabuta, Mayu Kashiwa, Wataru Tsukamoto, Maho Sato, Shigeki Ota, Syuichi Kobayashi, Naoki Masauzi, Hiromi Okada, Kazunori Kaga, Sanae Miwa, Keiko Kanai, Hiroshi Masauzi, Nobuo |
author_facet | Nakamura, Iori Ida, Haruhi Yabuta, Mayu Kashiwa, Wataru Tsukamoto, Maho Sato, Shigeki Ota, Syuichi Kobayashi, Naoki Masauzi, Hiromi Okada, Kazunori Kaga, Sanae Miwa, Keiko Kanai, Hiroshi Masauzi, Nobuo |
author_sort | Nakamura, Iori |
collection | PubMed |
description | Differential bone marrow (BM) cell counting is an important test for the diagnosis of various hematological diseases. However, it is difficult to accurately classify BM cells due to non-uniformity and the lack of reproducibility of differential counting. Therefore, automatic classification systems have been developed in which deep learning is used. These systems requires large and accurately labeled datasets for training. To overcome this, we used semi-supervised learning (SSL), in which learning proceeds while labeling. We used three methods: self-training (ST), active learning (AL), and a combination of these methods, and attempted to automatically classify 16 types of BM cell images. ST involves data verification, as in AL, before adding them to the training dataset (confirmed self-training: CST). After 25 rounds of CST, AL, and CST + AL, the initial number of training data increased from 425 to 40,518; 3682; and 47,843, respectively. Accuracies for the test data of 50 images for each cell type were 0.944, 0.941, and 0.976, respectively. Data added with CST or AL showed some imbalances between classes, while CST + AL exhibited fewer imbalances. We suggest that CST + AL, when combined with two SSL methods, is efficient in increasing training data for the development of automatic BM cells classification systems. |
format | Online Article Text |
id | pubmed-9537320 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-95373202022-10-08 Evaluation of two semi-supervised learning methods and their combination for automatic classification of bone marrow cells Nakamura, Iori Ida, Haruhi Yabuta, Mayu Kashiwa, Wataru Tsukamoto, Maho Sato, Shigeki Ota, Syuichi Kobayashi, Naoki Masauzi, Hiromi Okada, Kazunori Kaga, Sanae Miwa, Keiko Kanai, Hiroshi Masauzi, Nobuo Sci Rep Article Differential bone marrow (BM) cell counting is an important test for the diagnosis of various hematological diseases. However, it is difficult to accurately classify BM cells due to non-uniformity and the lack of reproducibility of differential counting. Therefore, automatic classification systems have been developed in which deep learning is used. These systems requires large and accurately labeled datasets for training. To overcome this, we used semi-supervised learning (SSL), in which learning proceeds while labeling. We used three methods: self-training (ST), active learning (AL), and a combination of these methods, and attempted to automatically classify 16 types of BM cell images. ST involves data verification, as in AL, before adding them to the training dataset (confirmed self-training: CST). After 25 rounds of CST, AL, and CST + AL, the initial number of training data increased from 425 to 40,518; 3682; and 47,843, respectively. Accuracies for the test data of 50 images for each cell type were 0.944, 0.941, and 0.976, respectively. Data added with CST or AL showed some imbalances between classes, while CST + AL exhibited fewer imbalances. We suggest that CST + AL, when combined with two SSL methods, is efficient in increasing training data for the development of automatic BM cells classification systems. Nature Publishing Group UK 2022-10-06 /pmc/articles/PMC9537320/ /pubmed/36202847 http://dx.doi.org/10.1038/s41598-022-20651-4 Text en © The Author(s) 2022 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Article Nakamura, Iori Ida, Haruhi Yabuta, Mayu Kashiwa, Wataru Tsukamoto, Maho Sato, Shigeki Ota, Syuichi Kobayashi, Naoki Masauzi, Hiromi Okada, Kazunori Kaga, Sanae Miwa, Keiko Kanai, Hiroshi Masauzi, Nobuo Evaluation of two semi-supervised learning methods and their combination for automatic classification of bone marrow cells |
title | Evaluation of two semi-supervised learning methods and their combination for automatic classification of bone marrow cells |
title_full | Evaluation of two semi-supervised learning methods and their combination for automatic classification of bone marrow cells |
title_fullStr | Evaluation of two semi-supervised learning methods and their combination for automatic classification of bone marrow cells |
title_full_unstemmed | Evaluation of two semi-supervised learning methods and their combination for automatic classification of bone marrow cells |
title_short | Evaluation of two semi-supervised learning methods and their combination for automatic classification of bone marrow cells |
title_sort | evaluation of two semi-supervised learning methods and their combination for automatic classification of bone marrow cells |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9537320/ https://www.ncbi.nlm.nih.gov/pubmed/36202847 http://dx.doi.org/10.1038/s41598-022-20651-4 |
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