Cargando…

First genetic maps development and QTL mining in Ranunculus asiaticus L. through ddRADseq

Persian Buttercup (Ranunculus asiaticus L.; 2x=2n=16; estimated genome size: 7.6Gb) is an ornamental and perennial crop native of Asia Minor and Mediterranean basin, marketed both as cut flower or potted plant. Currently new varieties are developed by selecting plants carrying desirable traits in se...

Descripción completa

Detalles Bibliográficos
Autores principales:	Martina, Matteo, Acquadro, Alberto, Gulino, Davide, Brusco, Fabio, Rabaglio, Mario, Portis, Ezio, Lanteri, Sergio
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Frontiers Media S.A. 2022
Materias:	Plant Science
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9539318/ https://www.ncbi.nlm.nih.gov/pubmed/36212343 http://dx.doi.org/10.3389/fpls.2022.1009206

Ejemplares similares

Evaluation of ddRADseq for reduced representation metagenome sequencing
por: Liu, Michael Y., et al.
Publicado: (2017)

Genome-Wide Survey and Development of the First Microsatellite Markers Database (AnCorDB) in Anemone coronaria L.
por: Martina, Matteo, et al.
Publicado: (2022)

High-quality genetic mapping with ddRADseq in the non-model tree Quercus rubra
por: Konar, Arpita, et al.
Publicado: (2017)

An approach using ddRADseq and machine learning for understanding speciation in Antarctic Antarctophilinidae gastropods
por: Moles, Juan, et al.
Publicado: (2021)

Cryptic genetic variation in an inbreeding and cosmopolitan pest, Xylosandrus crassiusculus, revealed using ddRADseq
por: Storer, Caroline, et al.
Publicado: (2017)

ddRADseq reveals determinants for temperature-dependent sex reversal in Nile tilapia on LG23
por: Wessels, Stephan, et al.
Publicado: (2017)

The taxonomic significance of ddRADseq based microsatellite markers in the closely related species of Heracleum (Apiaceae)
por: Daemi-Saeidabad, Mehdi, et al.
Publicado: (2020)

Genome-Wide Discovery of InDel Markers in Sesame (Sesamum indicum L.) Using ddRADSeq
por: Kizil, Sibel, et al.
Publicado: (2020)

Mixed-Mating Model of Reproduction Revealed in European Phytophthora cactorum by ddRADseq and Effector Gene Sequence Data
por: Pánek, Matěj, et al.
Publicado: (2021)

ddRADseq-assisted construction of a high-density SNP genetic map and QTL fine mapping for growth-related traits in the spotted scat (Scatophagus argus)
por: Yang, Wei, et al.
Publicado: (2020)

Relevance of ddRADseq method for species and population delimitation of closely related and widely distributed wolf spiders (Araneae, Lycosidae)
por: Ivanov, Vladislav, et al.
Publicado: (2021)

A basic ddRADseq two‐enzyme protocol performs well with herbarium and silica‐dried tissues across four genera
por: Jordon‐Thaden, Ingrid E., et al.
Publicado: (2020)

Construction of ddRADseq-Based High-Density Genetic Map and Identification of Quantitative Trait Loci for Trans-resveratrol Content in Peanut Seeds
por: Luo, Huaiyong, et al.
Publicado: (2021)

A first linkage map and downy mildew resistance QTL discovery for sweet basil (Ocimum basilicum) facilitated by double digestion restriction site associated DNA sequencing (ddRADseq)
por: Pyne, Robert, et al.
Publicado: (2017)

A ddRADseq Survey of the Genetic Diversity of Rye (Secale cereale L.) Landraces from the Western Alps Reveals the Progressive Reduction of the Local Gene Pool
por: Adamo, Martino, et al.
Publicado: (2021)

A Hybrid Genetic Linkage Map of Two Ecologically and Morphologically Divergent Midas Cichlid Fishes (Amphilophus spp.) Obtained by Massively Parallel DNA Sequencing (ddRADSeq)
por: Recknagel, Hans, et al.
Publicado: (2013)

Genetic mapping and identification of QTL for earliness in the globe artichoke/cultivated cardoon complex
por: Portis, Ezio, et al.
Publicado: (2012)

Genome-Wide Mapping of Growth-Related Quantitative Trait Loci in Orange-Spotted Grouper (Epinephelus coioides) Using Double Digest Restriction-Site Associated DNA Sequencing (ddRADseq)
por: Yu, Hui, et al.
Publicado: (2016)

Ontology and diversity of transcript-associated microsatellites mined from a globe artichoke EST database
por: Scaglione, Davide, et al.
Publicado: (2009)

Diversity analyses in two ornamental and large-genome Ranunculaceae species based on a low-cost Klenow NGS-based protocol
por: Martina, Matteo, et al.
Publicado: (2023)

Construction of a SNP-based genetic linkage map in cultivated peanut based on large scale marker development using next-generation double-digest restriction-site-associated DNA sequencing (ddRADseq)
por: Zhou, Xiaojing, et al.
Publicado: (2014)

Analysis of DNA Methylation Patterns Associated with In Vitro Propagated Globe Artichoke Plants Using an EpiRADseq-Based Approach
por: Cerruti, Elisa, et al.
Publicado: (2019)

Photosynthesis in Ranunculus asiaticus L.: The Influence of the Hybrid and the Preparation Procedure of Tuberous Roots
por: Carillo, Petronia, et al.
Publicado: (2019)

Metabolic Profiling in Tuberous Roots of Ranunculus asiaticus L. as Influenced by Vernalization Procedure
por: Fusco, Giovanna Marta, et al.
Publicado: (2023)

RAD tag sequencing as a source of SNP markers in Cynara cardunculus L
por: Scaglione, Davide, et al.
Publicado: (2012)

Vernalization Procedure of Tuberous Roots Affects Growth, Photosynthesis and Metabolic Profile of Ranunculus asiaticus L.
por: Fusco, Giovanna Marta, et al.
Publicado: (2023)

Metabolic Profile and Performance Responses of Ranunculus asiaticus L. Hybrids as Affected by Light Quality of Photoperiodic Lighting
por: Carillo, Petronia, et al.
Publicado: (2020)

Methylation content sensitive enzyme ddRAD (MCSeEd): a reference-free, whole genome profiling system to address cytosine/adenine methylation changes
por: Marconi, Gianpiero, et al.
Publicado: (2019)

“Mind the Gap”: Hi-C Technology Boosts Contiguity of the Globe Artichoke Genome in Low-Recombination Regions
por: Acquadro, Alberto, et al.
Publicado: (2020)

A Genome-Wide Survey of the Microsatellite Content of the Globe Artichoke Genome and the Development of a Web-Based Database
por: Portis, Ezio, et al.
Publicado: (2016)

Comprehensive Characterization of Simple Sequence Repeats in Eggplant (Solanum melongena L.) Genome and Construction of a Web Resource
por: Portis, Ezio, et al.
Publicado: (2018)

QTL Mapping in Eggplant Reveals Clusters of Yield-Related Loci and Orthology with the Tomato Genome
por: Portis, Ezio, et al.
Publicado: (2014)

Genome reconstruction in Cynara cardunculus taxa gains access to chromosome-scale DNA variation
por: Acquadro, Alberto, et al.
Publicado: (2017)

Identification of SNP and SSR markers in eggplant using RAD tag sequencing
por: Barchi, Lorenzo, et al.
Publicado: (2011)

High density SNP mapping and QTL analysis for time of leaf budburst in Corylus avellana L.
por: Torello Marinoni, Daniela, et al.
Publicado: (2018)

New Insights on Eggplant/Tomato/Pepper Synteny and Identification of Eggplant and Pepper Orthologous QTL
por: Rinaldi, Riccardo, et al.
Publicado: (2016)

Isolation and functional characterization of a cDNA coding a hydroxycinnamoyltransferase involved in phenylpropanoid biosynthesis in Cynara cardunculus L
por: Comino, Cinzia, et al.
Publicado: (2007)

Whole genome resequencing of four Italian sweet pepper landraces provides insights on sequence variation in genes of agronomic value
por: Acquadro, Alberto, et al.
Publicado: (2020)

Sampling for DUS Test of Flower Colors of Ranunculus asiaticus L. in View of Spatial and Temporal Changes of Flower Colorations, Anthocyanin Contents, and Gene Expression Levels
por: Liu, Yanfang, et al.
Publicado: (2019)

Coding SNPs analysis highlights genetic relationships and evolution pattern in eggplant complexes
por: Acquadro, Alberto, et al.
Publicado: (2017)

Cannot write session to /tmp/vufind_sessions/sess_j00ua6ce54a5nb8290t9g26ha3