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A supervised deep neural network approach with standardized targets for enhanced accuracy of IVIM parameter estimation from multi‐SNR images

Extraction of intravoxel incoherent motion (IVIM) parameters from noisy diffusion‐weighted (DW) images using a biexponential fitting model is computationally challenging, and the reliability of the estimated perfusion‐related quantities represents a limitation of this technique. Artificial intellige...

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Autores principales: Mastropietro, Alfonso, Procissi, Daniel, Scalco, Elisa, Rizzo, Giovanna, Bertolino, Nicola
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9539583/
https://www.ncbi.nlm.nih.gov/pubmed/35587618
http://dx.doi.org/10.1002/nbm.4774
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author Mastropietro, Alfonso
Procissi, Daniel
Scalco, Elisa
Rizzo, Giovanna
Bertolino, Nicola
author_facet Mastropietro, Alfonso
Procissi, Daniel
Scalco, Elisa
Rizzo, Giovanna
Bertolino, Nicola
author_sort Mastropietro, Alfonso
collection PubMed
description Extraction of intravoxel incoherent motion (IVIM) parameters from noisy diffusion‐weighted (DW) images using a biexponential fitting model is computationally challenging, and the reliability of the estimated perfusion‐related quantities represents a limitation of this technique. Artificial intelligence can overcome the current limitations and be a suitable solution to advance use of this technique in both preclinical and clinical settings. The purpose of this work was to develop a deep neural network (DNN) approach, trained on numerical simulated phantoms with different signal to noise ratios (SNRs), to improve IVIM parameter estimation. The proposed approach is based on a supervised fully connected DNN having 3 hidden layers, 18 inputs and 3 targets with standardized values. 14 × 10(3) simulated DW images, based on a Shepp–Logan phantom, were randomly generated with varying SNRs (ranging from 10 to 100). 7 × 10(3) images (1000 for each SNR) were used for training. Performance accuracy was assessed in simulated images and the proposed approach was compared with the state‐of‐the‐art Bayesian approach and other DNN algorithms. The DNN approach was also evaluated in vivo on a high‐field MRI preclinical scanner. Our DNN approach showed an overall improvement in accuracy when compared with the Bayesian approach and other DNN methods in most of the simulated conditions. The in vivo results demonstrated the feasibility of the proposed approach in real settings and generated quantitative results comparable to those obtained using the Bayesian and unsupervised approaches, especially for D and f, and with lower variability in homogeneous regions. The DNN architecture proposed in this work outlines two innovative features as compared with other studies: (1) the use of standardized targets to improve the estimation of parameters, and (2) the implementation of a single DNN to enhance the IVIM fitting at different SNRs, providing a valuable alternative tool to compute IVIM parameters in conditions of high background noise.
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spelling pubmed-95395832022-10-14 A supervised deep neural network approach with standardized targets for enhanced accuracy of IVIM parameter estimation from multi‐SNR images Mastropietro, Alfonso Procissi, Daniel Scalco, Elisa Rizzo, Giovanna Bertolino, Nicola NMR Biomed Research Articles Extraction of intravoxel incoherent motion (IVIM) parameters from noisy diffusion‐weighted (DW) images using a biexponential fitting model is computationally challenging, and the reliability of the estimated perfusion‐related quantities represents a limitation of this technique. Artificial intelligence can overcome the current limitations and be a suitable solution to advance use of this technique in both preclinical and clinical settings. The purpose of this work was to develop a deep neural network (DNN) approach, trained on numerical simulated phantoms with different signal to noise ratios (SNRs), to improve IVIM parameter estimation. The proposed approach is based on a supervised fully connected DNN having 3 hidden layers, 18 inputs and 3 targets with standardized values. 14 × 10(3) simulated DW images, based on a Shepp–Logan phantom, were randomly generated with varying SNRs (ranging from 10 to 100). 7 × 10(3) images (1000 for each SNR) were used for training. Performance accuracy was assessed in simulated images and the proposed approach was compared with the state‐of‐the‐art Bayesian approach and other DNN algorithms. The DNN approach was also evaluated in vivo on a high‐field MRI preclinical scanner. Our DNN approach showed an overall improvement in accuracy when compared with the Bayesian approach and other DNN methods in most of the simulated conditions. The in vivo results demonstrated the feasibility of the proposed approach in real settings and generated quantitative results comparable to those obtained using the Bayesian and unsupervised approaches, especially for D and f, and with lower variability in homogeneous regions. The DNN architecture proposed in this work outlines two innovative features as compared with other studies: (1) the use of standardized targets to improve the estimation of parameters, and (2) the implementation of a single DNN to enhance the IVIM fitting at different SNRs, providing a valuable alternative tool to compute IVIM parameters in conditions of high background noise. John Wiley and Sons Inc. 2022-06-06 2022-10 /pmc/articles/PMC9539583/ /pubmed/35587618 http://dx.doi.org/10.1002/nbm.4774 Text en © 2022 The Authors. NMR in Biomedicine published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Mastropietro, Alfonso
Procissi, Daniel
Scalco, Elisa
Rizzo, Giovanna
Bertolino, Nicola
A supervised deep neural network approach with standardized targets for enhanced accuracy of IVIM parameter estimation from multi‐SNR images
title A supervised deep neural network approach with standardized targets for enhanced accuracy of IVIM parameter estimation from multi‐SNR images
title_full A supervised deep neural network approach with standardized targets for enhanced accuracy of IVIM parameter estimation from multi‐SNR images
title_fullStr A supervised deep neural network approach with standardized targets for enhanced accuracy of IVIM parameter estimation from multi‐SNR images
title_full_unstemmed A supervised deep neural network approach with standardized targets for enhanced accuracy of IVIM parameter estimation from multi‐SNR images
title_short A supervised deep neural network approach with standardized targets for enhanced accuracy of IVIM parameter estimation from multi‐SNR images
title_sort supervised deep neural network approach with standardized targets for enhanced accuracy of ivim parameter estimation from multi‐snr images
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9539583/
https://www.ncbi.nlm.nih.gov/pubmed/35587618
http://dx.doi.org/10.1002/nbm.4774
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