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Development and optimization of NIRS prediction models for simultaneous multi-trait assessment in diverse cowpea germplasm

Cowpea (Vigna unguiculata (L.) Walp.) is one such legume that can facilitate achieving sustainable nutrition and climate change goals. Assessing nutritional traits conventionally can be laborious and time-consuming. NIRS is a technique used to rapidly determine biochemical parameters for large germp...

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Autores principales: Padhi, Siddhant Ranjan, John, Racheal, Bartwal, Arti, Tripathi, Kuldeep, Gupta, Kavita, Wankhede, Dhammaprakash Pandhari, Mishra, Gyan Prakash, Kumar, Sanjeev, Rana, Jai Chand, Riar, Amritbir, Bhardwaj, Rakesh
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9539642/
https://www.ncbi.nlm.nih.gov/pubmed/36211514
http://dx.doi.org/10.3389/fnut.2022.1001551
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author Padhi, Siddhant Ranjan
John, Racheal
Bartwal, Arti
Tripathi, Kuldeep
Gupta, Kavita
Wankhede, Dhammaprakash Pandhari
Mishra, Gyan Prakash
Kumar, Sanjeev
Rana, Jai Chand
Riar, Amritbir
Bhardwaj, Rakesh
author_facet Padhi, Siddhant Ranjan
John, Racheal
Bartwal, Arti
Tripathi, Kuldeep
Gupta, Kavita
Wankhede, Dhammaprakash Pandhari
Mishra, Gyan Prakash
Kumar, Sanjeev
Rana, Jai Chand
Riar, Amritbir
Bhardwaj, Rakesh
author_sort Padhi, Siddhant Ranjan
collection PubMed
description Cowpea (Vigna unguiculata (L.) Walp.) is one such legume that can facilitate achieving sustainable nutrition and climate change goals. Assessing nutritional traits conventionally can be laborious and time-consuming. NIRS is a technique used to rapidly determine biochemical parameters for large germplasm. NIRS prediction models were developed to assess protein, starch, TDF, phenols, and phytic acid based on MPLS regression. Higher RSQ(external) values such as 0.903, 0.997, 0.901, 0.706, and 0.955 were obtained for protein, starch, TDF, phenols, and phytic acid respectively. Models for all the traits displayed RPD values of >2.5 except phenols and low SEP indicating the excellent prediction of models. For all the traits worked, p-value ≥ 0.05 implied the accuracy and reliability score >0.8 (except phenol) ensured the applicability of the models. These prediction models will facilitate high throughput screening of large cowpea germplasm in a non-destructive way and the selection of desirable chemotypes in any genetic background with huge application in cowpea crop improvement programs across the world.
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spelling pubmed-95396422022-10-08 Development and optimization of NIRS prediction models for simultaneous multi-trait assessment in diverse cowpea germplasm Padhi, Siddhant Ranjan John, Racheal Bartwal, Arti Tripathi, Kuldeep Gupta, Kavita Wankhede, Dhammaprakash Pandhari Mishra, Gyan Prakash Kumar, Sanjeev Rana, Jai Chand Riar, Amritbir Bhardwaj, Rakesh Front Nutr Nutrition Cowpea (Vigna unguiculata (L.) Walp.) is one such legume that can facilitate achieving sustainable nutrition and climate change goals. Assessing nutritional traits conventionally can be laborious and time-consuming. NIRS is a technique used to rapidly determine biochemical parameters for large germplasm. NIRS prediction models were developed to assess protein, starch, TDF, phenols, and phytic acid based on MPLS regression. Higher RSQ(external) values such as 0.903, 0.997, 0.901, 0.706, and 0.955 were obtained for protein, starch, TDF, phenols, and phytic acid respectively. Models for all the traits displayed RPD values of >2.5 except phenols and low SEP indicating the excellent prediction of models. For all the traits worked, p-value ≥ 0.05 implied the accuracy and reliability score >0.8 (except phenol) ensured the applicability of the models. These prediction models will facilitate high throughput screening of large cowpea germplasm in a non-destructive way and the selection of desirable chemotypes in any genetic background with huge application in cowpea crop improvement programs across the world. Frontiers Media S.A. 2022-09-23 /pmc/articles/PMC9539642/ /pubmed/36211514 http://dx.doi.org/10.3389/fnut.2022.1001551 Text en Copyright © 2022 Padhi, John, Bartwal, Tripathi, Gupta, Wankhede, Mishra, Kumar, Rana, Riar and Bhardwaj. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Nutrition
Padhi, Siddhant Ranjan
John, Racheal
Bartwal, Arti
Tripathi, Kuldeep
Gupta, Kavita
Wankhede, Dhammaprakash Pandhari
Mishra, Gyan Prakash
Kumar, Sanjeev
Rana, Jai Chand
Riar, Amritbir
Bhardwaj, Rakesh
Development and optimization of NIRS prediction models for simultaneous multi-trait assessment in diverse cowpea germplasm
title Development and optimization of NIRS prediction models for simultaneous multi-trait assessment in diverse cowpea germplasm
title_full Development and optimization of NIRS prediction models for simultaneous multi-trait assessment in diverse cowpea germplasm
title_fullStr Development and optimization of NIRS prediction models for simultaneous multi-trait assessment in diverse cowpea germplasm
title_full_unstemmed Development and optimization of NIRS prediction models for simultaneous multi-trait assessment in diverse cowpea germplasm
title_short Development and optimization of NIRS prediction models for simultaneous multi-trait assessment in diverse cowpea germplasm
title_sort development and optimization of nirs prediction models for simultaneous multi-trait assessment in diverse cowpea germplasm
topic Nutrition
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9539642/
https://www.ncbi.nlm.nih.gov/pubmed/36211514
http://dx.doi.org/10.3389/fnut.2022.1001551
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