Cargando…
Development and optimization of NIRS prediction models for simultaneous multi-trait assessment in diverse cowpea germplasm
Cowpea (Vigna unguiculata (L.) Walp.) is one such legume that can facilitate achieving sustainable nutrition and climate change goals. Assessing nutritional traits conventionally can be laborious and time-consuming. NIRS is a technique used to rapidly determine biochemical parameters for large germp...
Autores principales: | , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2022
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9539642/ https://www.ncbi.nlm.nih.gov/pubmed/36211514 http://dx.doi.org/10.3389/fnut.2022.1001551 |
_version_ | 1784803533539770368 |
---|---|
author | Padhi, Siddhant Ranjan John, Racheal Bartwal, Arti Tripathi, Kuldeep Gupta, Kavita Wankhede, Dhammaprakash Pandhari Mishra, Gyan Prakash Kumar, Sanjeev Rana, Jai Chand Riar, Amritbir Bhardwaj, Rakesh |
author_facet | Padhi, Siddhant Ranjan John, Racheal Bartwal, Arti Tripathi, Kuldeep Gupta, Kavita Wankhede, Dhammaprakash Pandhari Mishra, Gyan Prakash Kumar, Sanjeev Rana, Jai Chand Riar, Amritbir Bhardwaj, Rakesh |
author_sort | Padhi, Siddhant Ranjan |
collection | PubMed |
description | Cowpea (Vigna unguiculata (L.) Walp.) is one such legume that can facilitate achieving sustainable nutrition and climate change goals. Assessing nutritional traits conventionally can be laborious and time-consuming. NIRS is a technique used to rapidly determine biochemical parameters for large germplasm. NIRS prediction models were developed to assess protein, starch, TDF, phenols, and phytic acid based on MPLS regression. Higher RSQ(external) values such as 0.903, 0.997, 0.901, 0.706, and 0.955 were obtained for protein, starch, TDF, phenols, and phytic acid respectively. Models for all the traits displayed RPD values of >2.5 except phenols and low SEP indicating the excellent prediction of models. For all the traits worked, p-value ≥ 0.05 implied the accuracy and reliability score >0.8 (except phenol) ensured the applicability of the models. These prediction models will facilitate high throughput screening of large cowpea germplasm in a non-destructive way and the selection of desirable chemotypes in any genetic background with huge application in cowpea crop improvement programs across the world. |
format | Online Article Text |
id | pubmed-9539642 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-95396422022-10-08 Development and optimization of NIRS prediction models for simultaneous multi-trait assessment in diverse cowpea germplasm Padhi, Siddhant Ranjan John, Racheal Bartwal, Arti Tripathi, Kuldeep Gupta, Kavita Wankhede, Dhammaprakash Pandhari Mishra, Gyan Prakash Kumar, Sanjeev Rana, Jai Chand Riar, Amritbir Bhardwaj, Rakesh Front Nutr Nutrition Cowpea (Vigna unguiculata (L.) Walp.) is one such legume that can facilitate achieving sustainable nutrition and climate change goals. Assessing nutritional traits conventionally can be laborious and time-consuming. NIRS is a technique used to rapidly determine biochemical parameters for large germplasm. NIRS prediction models were developed to assess protein, starch, TDF, phenols, and phytic acid based on MPLS regression. Higher RSQ(external) values such as 0.903, 0.997, 0.901, 0.706, and 0.955 were obtained for protein, starch, TDF, phenols, and phytic acid respectively. Models for all the traits displayed RPD values of >2.5 except phenols and low SEP indicating the excellent prediction of models. For all the traits worked, p-value ≥ 0.05 implied the accuracy and reliability score >0.8 (except phenol) ensured the applicability of the models. These prediction models will facilitate high throughput screening of large cowpea germplasm in a non-destructive way and the selection of desirable chemotypes in any genetic background with huge application in cowpea crop improvement programs across the world. Frontiers Media S.A. 2022-09-23 /pmc/articles/PMC9539642/ /pubmed/36211514 http://dx.doi.org/10.3389/fnut.2022.1001551 Text en Copyright © 2022 Padhi, John, Bartwal, Tripathi, Gupta, Wankhede, Mishra, Kumar, Rana, Riar and Bhardwaj. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Nutrition Padhi, Siddhant Ranjan John, Racheal Bartwal, Arti Tripathi, Kuldeep Gupta, Kavita Wankhede, Dhammaprakash Pandhari Mishra, Gyan Prakash Kumar, Sanjeev Rana, Jai Chand Riar, Amritbir Bhardwaj, Rakesh Development and optimization of NIRS prediction models for simultaneous multi-trait assessment in diverse cowpea germplasm |
title | Development and optimization of NIRS prediction models for simultaneous multi-trait assessment in diverse cowpea germplasm |
title_full | Development and optimization of NIRS prediction models for simultaneous multi-trait assessment in diverse cowpea germplasm |
title_fullStr | Development and optimization of NIRS prediction models for simultaneous multi-trait assessment in diverse cowpea germplasm |
title_full_unstemmed | Development and optimization of NIRS prediction models for simultaneous multi-trait assessment in diverse cowpea germplasm |
title_short | Development and optimization of NIRS prediction models for simultaneous multi-trait assessment in diverse cowpea germplasm |
title_sort | development and optimization of nirs prediction models for simultaneous multi-trait assessment in diverse cowpea germplasm |
topic | Nutrition |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9539642/ https://www.ncbi.nlm.nih.gov/pubmed/36211514 http://dx.doi.org/10.3389/fnut.2022.1001551 |
work_keys_str_mv | AT padhisiddhantranjan developmentandoptimizationofnirspredictionmodelsforsimultaneousmultitraitassessmentindiversecowpeagermplasm AT johnracheal developmentandoptimizationofnirspredictionmodelsforsimultaneousmultitraitassessmentindiversecowpeagermplasm AT bartwalarti developmentandoptimizationofnirspredictionmodelsforsimultaneousmultitraitassessmentindiversecowpeagermplasm AT tripathikuldeep developmentandoptimizationofnirspredictionmodelsforsimultaneousmultitraitassessmentindiversecowpeagermplasm AT guptakavita developmentandoptimizationofnirspredictionmodelsforsimultaneousmultitraitassessmentindiversecowpeagermplasm AT wankhededhammaprakashpandhari developmentandoptimizationofnirspredictionmodelsforsimultaneousmultitraitassessmentindiversecowpeagermplasm AT mishragyanprakash developmentandoptimizationofnirspredictionmodelsforsimultaneousmultitraitassessmentindiversecowpeagermplasm AT kumarsanjeev developmentandoptimizationofnirspredictionmodelsforsimultaneousmultitraitassessmentindiversecowpeagermplasm AT ranajaichand developmentandoptimizationofnirspredictionmodelsforsimultaneousmultitraitassessmentindiversecowpeagermplasm AT riaramritbir developmentandoptimizationofnirspredictionmodelsforsimultaneousmultitraitassessmentindiversecowpeagermplasm AT bhardwajrakesh developmentandoptimizationofnirspredictionmodelsforsimultaneousmultitraitassessmentindiversecowpeagermplasm |