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Antiviral COVID-19 protein and molecular docking: In silico characterization of various antiviral compounds extracted from Arisaema jacquemontii Blume
Arisaema jacquemontii Blume is a highly medicinal and poisonous plant belong to the family Araceae. It is used to treat several deadly diseases, including viral infections. It has antioxidant, anti-cancerous, antimalarial, anti-vermicidal, and antiviral activities. Therefore, five parts of the Arisa...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Frontiers Media S.A.
2022
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9540392/ https://www.ncbi.nlm.nih.gov/pubmed/36211701 http://dx.doi.org/10.3389/fpubh.2022.964741 |
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author | Shehzadi, Sara Khan, Shujaul Mulk Mustafa, Ghazala Abdullah, Abdullah Khan, Ilham Ahmad, Zeeshan Han, Heesup Yu, Jongsik Park, Junghyun Raposo, António |
author_facet | Shehzadi, Sara Khan, Shujaul Mulk Mustafa, Ghazala Abdullah, Abdullah Khan, Ilham Ahmad, Zeeshan Han, Heesup Yu, Jongsik Park, Junghyun Raposo, António |
author_sort | Shehzadi, Sara |
collection | PubMed |
description | Arisaema jacquemontii Blume is a highly medicinal and poisonous plant belong to the family Araceae. It is used to treat several deadly diseases, including viral infections. It has antioxidant, anti-cancerous, antimalarial, anti-vermicidal, and antiviral activities. Therefore, five parts of the Arisaema jacquemontii Blume plant, such as leaf, seed, stem, pulp, and rhizome extract, were evaluated for metabolic and in silico characterization of probable compounds using gas chromatography-mass spectrometry (GC-MS) analysis. A total of 22 compounds were isolated from the methanolic extracts of A. jacquemontii Blume. A selected antiviral COVID-19 protein i.e., protease (6LU7) was docked against the obtained compounds. Different affinities were obtained through various compounds. The best results were shown by three different compounds identified in the rhizome. The maximum binding affinity of these compounds is 8.1 kJ/mol. Molecular docking (MD) indicate that these molecules have the highest binding energies and hydrogen bonding interactions. The binding mode of interaction was discovered to be reasonably effective for counteracting the SARS virus COVID-19. The findings of this study could be extremely useful in the development of more phytochemical-based COVID-19 therapeutics. |
format | Online Article Text |
id | pubmed-9540392 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-95403922022-10-08 Antiviral COVID-19 protein and molecular docking: In silico characterization of various antiviral compounds extracted from Arisaema jacquemontii Blume Shehzadi, Sara Khan, Shujaul Mulk Mustafa, Ghazala Abdullah, Abdullah Khan, Ilham Ahmad, Zeeshan Han, Heesup Yu, Jongsik Park, Junghyun Raposo, António Front Public Health Public Health Arisaema jacquemontii Blume is a highly medicinal and poisonous plant belong to the family Araceae. It is used to treat several deadly diseases, including viral infections. It has antioxidant, anti-cancerous, antimalarial, anti-vermicidal, and antiviral activities. Therefore, five parts of the Arisaema jacquemontii Blume plant, such as leaf, seed, stem, pulp, and rhizome extract, were evaluated for metabolic and in silico characterization of probable compounds using gas chromatography-mass spectrometry (GC-MS) analysis. A total of 22 compounds were isolated from the methanolic extracts of A. jacquemontii Blume. A selected antiviral COVID-19 protein i.e., protease (6LU7) was docked against the obtained compounds. Different affinities were obtained through various compounds. The best results were shown by three different compounds identified in the rhizome. The maximum binding affinity of these compounds is 8.1 kJ/mol. Molecular docking (MD) indicate that these molecules have the highest binding energies and hydrogen bonding interactions. The binding mode of interaction was discovered to be reasonably effective for counteracting the SARS virus COVID-19. The findings of this study could be extremely useful in the development of more phytochemical-based COVID-19 therapeutics. Frontiers Media S.A. 2022-09-23 /pmc/articles/PMC9540392/ /pubmed/36211701 http://dx.doi.org/10.3389/fpubh.2022.964741 Text en Copyright © 2022 Shehzadi, Khan, Mustafa, Abdullah, Khan, Ahmad, Han, Yu, Park and Raposo. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Public Health Shehzadi, Sara Khan, Shujaul Mulk Mustafa, Ghazala Abdullah, Abdullah Khan, Ilham Ahmad, Zeeshan Han, Heesup Yu, Jongsik Park, Junghyun Raposo, António Antiviral COVID-19 protein and molecular docking: In silico characterization of various antiviral compounds extracted from Arisaema jacquemontii Blume |
title | Antiviral COVID-19 protein and molecular docking: In silico characterization of various antiviral compounds extracted from Arisaema jacquemontii Blume |
title_full | Antiviral COVID-19 protein and molecular docking: In silico characterization of various antiviral compounds extracted from Arisaema jacquemontii Blume |
title_fullStr | Antiviral COVID-19 protein and molecular docking: In silico characterization of various antiviral compounds extracted from Arisaema jacquemontii Blume |
title_full_unstemmed | Antiviral COVID-19 protein and molecular docking: In silico characterization of various antiviral compounds extracted from Arisaema jacquemontii Blume |
title_short | Antiviral COVID-19 protein and molecular docking: In silico characterization of various antiviral compounds extracted from Arisaema jacquemontii Blume |
title_sort | antiviral covid-19 protein and molecular docking: in silico characterization of various antiviral compounds extracted from arisaema jacquemontii blume |
topic | Public Health |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9540392/ https://www.ncbi.nlm.nih.gov/pubmed/36211701 http://dx.doi.org/10.3389/fpubh.2022.964741 |
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