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Antiviral COVID-19 protein and molecular docking: In silico characterization of various antiviral compounds extracted from Arisaema jacquemontii Blume

Arisaema jacquemontii Blume is a highly medicinal and poisonous plant belong to the family Araceae. It is used to treat several deadly diseases, including viral infections. It has antioxidant, anti-cancerous, antimalarial, anti-vermicidal, and antiviral activities. Therefore, five parts of the Arisa...

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Autores principales: Shehzadi, Sara, Khan, Shujaul Mulk, Mustafa, Ghazala, Abdullah, Abdullah, Khan, Ilham, Ahmad, Zeeshan, Han, Heesup, Yu, Jongsik, Park, Junghyun, Raposo, António
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2022
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9540392/
https://www.ncbi.nlm.nih.gov/pubmed/36211701
http://dx.doi.org/10.3389/fpubh.2022.964741
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author Shehzadi, Sara
Khan, Shujaul Mulk
Mustafa, Ghazala
Abdullah, Abdullah
Khan, Ilham
Ahmad, Zeeshan
Han, Heesup
Yu, Jongsik
Park, Junghyun
Raposo, António
author_facet Shehzadi, Sara
Khan, Shujaul Mulk
Mustafa, Ghazala
Abdullah, Abdullah
Khan, Ilham
Ahmad, Zeeshan
Han, Heesup
Yu, Jongsik
Park, Junghyun
Raposo, António
author_sort Shehzadi, Sara
collection PubMed
description Arisaema jacquemontii Blume is a highly medicinal and poisonous plant belong to the family Araceae. It is used to treat several deadly diseases, including viral infections. It has antioxidant, anti-cancerous, antimalarial, anti-vermicidal, and antiviral activities. Therefore, five parts of the Arisaema jacquemontii Blume plant, such as leaf, seed, stem, pulp, and rhizome extract, were evaluated for metabolic and in silico characterization of probable compounds using gas chromatography-mass spectrometry (GC-MS) analysis. A total of 22 compounds were isolated from the methanolic extracts of A. jacquemontii Blume. A selected antiviral COVID-19 protein i.e., protease (6LU7) was docked against the obtained compounds. Different affinities were obtained through various compounds. The best results were shown by three different compounds identified in the rhizome. The maximum binding affinity of these compounds is 8.1 kJ/mol. Molecular docking (MD) indicate that these molecules have the highest binding energies and hydrogen bonding interactions. The binding mode of interaction was discovered to be reasonably effective for counteracting the SARS virus COVID-19. The findings of this study could be extremely useful in the development of more phytochemical-based COVID-19 therapeutics.
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spelling pubmed-95403922022-10-08 Antiviral COVID-19 protein and molecular docking: In silico characterization of various antiviral compounds extracted from Arisaema jacquemontii Blume Shehzadi, Sara Khan, Shujaul Mulk Mustafa, Ghazala Abdullah, Abdullah Khan, Ilham Ahmad, Zeeshan Han, Heesup Yu, Jongsik Park, Junghyun Raposo, António Front Public Health Public Health Arisaema jacquemontii Blume is a highly medicinal and poisonous plant belong to the family Araceae. It is used to treat several deadly diseases, including viral infections. It has antioxidant, anti-cancerous, antimalarial, anti-vermicidal, and antiviral activities. Therefore, five parts of the Arisaema jacquemontii Blume plant, such as leaf, seed, stem, pulp, and rhizome extract, were evaluated for metabolic and in silico characterization of probable compounds using gas chromatography-mass spectrometry (GC-MS) analysis. A total of 22 compounds were isolated from the methanolic extracts of A. jacquemontii Blume. A selected antiviral COVID-19 protein i.e., protease (6LU7) was docked against the obtained compounds. Different affinities were obtained through various compounds. The best results were shown by three different compounds identified in the rhizome. The maximum binding affinity of these compounds is 8.1 kJ/mol. Molecular docking (MD) indicate that these molecules have the highest binding energies and hydrogen bonding interactions. The binding mode of interaction was discovered to be reasonably effective for counteracting the SARS virus COVID-19. The findings of this study could be extremely useful in the development of more phytochemical-based COVID-19 therapeutics. Frontiers Media S.A. 2022-09-23 /pmc/articles/PMC9540392/ /pubmed/36211701 http://dx.doi.org/10.3389/fpubh.2022.964741 Text en Copyright © 2022 Shehzadi, Khan, Mustafa, Abdullah, Khan, Ahmad, Han, Yu, Park and Raposo. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Public Health
Shehzadi, Sara
Khan, Shujaul Mulk
Mustafa, Ghazala
Abdullah, Abdullah
Khan, Ilham
Ahmad, Zeeshan
Han, Heesup
Yu, Jongsik
Park, Junghyun
Raposo, António
Antiviral COVID-19 protein and molecular docking: In silico characterization of various antiviral compounds extracted from Arisaema jacquemontii Blume
title Antiviral COVID-19 protein and molecular docking: In silico characterization of various antiviral compounds extracted from Arisaema jacquemontii Blume
title_full Antiviral COVID-19 protein and molecular docking: In silico characterization of various antiviral compounds extracted from Arisaema jacquemontii Blume
title_fullStr Antiviral COVID-19 protein and molecular docking: In silico characterization of various antiviral compounds extracted from Arisaema jacquemontii Blume
title_full_unstemmed Antiviral COVID-19 protein and molecular docking: In silico characterization of various antiviral compounds extracted from Arisaema jacquemontii Blume
title_short Antiviral COVID-19 protein and molecular docking: In silico characterization of various antiviral compounds extracted from Arisaema jacquemontii Blume
title_sort antiviral covid-19 protein and molecular docking: in silico characterization of various antiviral compounds extracted from arisaema jacquemontii blume
topic Public Health
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9540392/
https://www.ncbi.nlm.nih.gov/pubmed/36211701
http://dx.doi.org/10.3389/fpubh.2022.964741
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